Oil-derived marine aggregates - hot spots of polysaccharide degradation by specialized bacterial communities

被引:46
作者
Arnosti, Carol [1 ]
Ziervogel, Kai [1 ]
Yang, Tingting [1 ]
Teske, Andreas [1 ]
机构
[1] Univ N Carolina, Dept Marine Sci, 3117 Venable Hall, Chapel Hill, NC 27599 USA
基金
美国国家科学基金会;
关键词
Community composition; Enzyme; Carbohydrates; HYDROCARBON-DEGRADING BACTERIUM; SP-NOV; GEN; NOV; ENZYME-ACTIVITIES; WATER COLUMN; HALOMONAS; SEDIMENTS; MARINOBACTER; DIVERSITY; SEQUENCE;
D O I
10.1016/j.dsr2.2014.12.008
中图分类号
P7 [海洋学];
学科分类号
0707 ;
摘要
Aggregates generated in the laboratory from incubations of seawater and surface-water oil collected in the initial phase of the Deepwater Horizon oil spill resemble the oil-aggregates observed in situ. Here, we investigated the enzyme activities and microbial community composition of laboratory generated oil aggregates, focusing on the abilities of these communities to degrade polysaccharides, which are major components of marine organic matter and are abundant constituents of exopolymeric substances (EPS) generated by oil-associated bacteria in response to the presence of oil. The patterns of polysaccharide hydrolyzing enzyme activities in oil aggregates were very different from those in the water surrounding the aggregates after formation, and in the surface water that did not contain the oil. Specific oil aggregate-associated hydrolysis rates were also considerably higher than in the water surrounding the aggregates. The differences in initial hydrolysis profiles, and in evolution of these profiles with time, points to specialized metabolic abilities among the oil-aggregate communities compared to oil-water and ambient water communities. The composition of the oil-aggregate community indicates a multifunctional microbial assemblage containing primary oil-degrading and exopolysaccharide-producing members of the Gammaproteobacteria, and diverse members of the Alphaproteobacteria, Bacteroidetes and Planktomycetales that most likely participate in the breakdown of oil-derived bacterial biopolymers. Formation and aging of oil-aggregates encourages the growth and transformation of microbial communities that are specialized in degradation of petroleum, as well as their secondary degradation products. (C) 2014 Elsevier Ltd. All rights reserved.
引用
收藏
页码:179 / 186
页数:8
相关论文
共 64 条
[1]   Characterization of marine bacteria and the activity of their enzyme systems involved in degradation of the algal storage glucan laminarin [J].
Alderkamp, Anne-Carlijn ;
van Rijssel, Marion ;
Bolhuis, Henk .
FEMS MICROBIOLOGY ECOLOGY, 2007, 59 (01) :108-117
[2]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[3]  
[Anonymous], 2007, Int J Syst Evol Microbiol, V57, P893, DOI 10.1099/ijs.0.65207-0
[4]   Exopolysaccharides produced by the recently described halophilic bacteria Halomonas ventosae and Halomonas anticariensis [J].
Antonio Mata, Juan ;
Bejar, Victoria ;
Llamas, Inmaculada ;
Arias, Soledad ;
Bressollier, Philippe ;
Tallon, Richard ;
Urdaci, Maria C. ;
Quesada, Emilia .
RESEARCH IN MICROBIOLOGY, 2006, 157 (09) :827-835
[5]   Cloning, sequencing, and expression in Escherichia coli of the new gene encoding β-1,3-xylanase from a marine bacterium, Vibrio sp strain XY-214 [J].
Araki, T ;
Hashikawa, S ;
Morishita, T .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (04) :1741-1743
[6]   MEASUREMENT OF DEPTH-RELATED AND SITE-RELATED DIFFERENCES IN POLYSACCHARIDE HYDROLYSIS RATES IN MARINE-SEDIMENTS [J].
ARNOSTI, C .
GEOCHIMICA ET COSMOCHIMICA ACTA, 1995, 59 (20) :4247-4257
[7]   Fluorescent derivatization of polysaccharides and carbohydrate-containing biopolymers for measurement of enzyme activities in complex media [J].
Arnosti, C .
JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES, 2003, 793 (01) :181-191
[8]   Enzyme activities in the water column and in shallow permeable sediments from the northeastern Gulf of Mexico [J].
Arnosti, C. ;
Ziervogel, K. ;
Ocampo, L. ;
Ghobrial, S. .
ESTUARINE COASTAL AND SHELF SCIENCE, 2009, 84 (02) :202-208
[9]   EXTRACELLULAR ENZYME-ACTIVITY IN ANAEROBIC BACTERIAL CULTURES - EVIDENCE OF PULLULANASE ACTIVITY AMONG MESOPHILIC MARINE-BACTERIA [J].
ARNOSTI, C ;
REPETA, DJ .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1994, 60 (03) :840-846
[10]   Microbial Extracellular Enzymes and the Marine Carbon Cycle [J].
Arnosti, Carol .
ANNUAL REVIEW OF MARINE SCIENCE, VOL 3, 2011, 3 :401-425