Functional genomics approaches to studies of the cytochrome P450 superfamily

被引:11
作者
Rezen, Tadeja [1 ]
Contreras, Juan A. [1 ]
Rozman, Damjana [1 ]
机构
[1] Univ Ljubljana, Fac Med, Inst Biochem, Ctr Funct Genom & Bio Chips, SI-1000 Ljubljana, Slovenia
关键词
functional genomics; microarray; genomics; cytochrome P450; proteomics; steroltalk; pharmacogenomics; toxicogenomics;
D O I
10.1080/03602530701498760
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Functional genoinics approaches are widely implemented in current research and have found application in many areas of biology. This review will present research fields, novel findings and new tools developed in the cytochrome P450 field using the functional genomics techniques. The most widely used method is microarray technology, which has already greatly contributed to the understanding of the cytochromes P450 function and expression. Several focused CYP microarrays have been developed for genotyping, toxicogenomics and studies of CYP function of many different organisms. Our contribution to the CYP field by development of Steroltalk microarrays to study the cross-talk of cholesterol homeostasis and drug metabolism is also presented.
引用
收藏
页码:389 / 399
页数:11
相关论文
共 96 条
  • [1] Cell lines from the same cervical carcinoma but with different radiosensitivities exhibit different cDNA microarray patterns of gene expression
    Achary, MP
    Jaggernauth, W
    Gross, E
    Alfieri, A
    Klinger, HP
    Vikram, B
    [J]. CYTOGENETICS AND CELL GENETICS, 2000, 91 (1-4): : 39 - 43
  • [2] Sexual dimorphism of rat liver gene expression: Regulatory role of growth hormone revealed by deoxyribonucleic acid microarray analysis
    Ahluwalia, A
    Clodfelter, KH
    Waxman, DJ
    [J]. MOLECULAR ENDOCRINOLOGY, 2004, 18 (03) : 747 - 760
  • [3] Serial analysis of gene expression in normal p53 null mammary epithelium
    Aldaz, CM
    Hu, YH
    Daniel, R
    Gaddis, S
    Kittrell, F
    Medina, D
    [J]. ONCOGENE, 2002, 21 (41) : 6366 - 6376
  • [4] Quantitative analysis of cytochrome P450 isozymes by means of unique isozyme-specific tryptic peptides: A proteomic approach
    Alterman, MA
    Kornilayev, B
    Duzhak, T
    Yakovlev, D
    [J]. DRUG METABOLISM AND DISPOSITION, 2005, 33 (09) : 1399 - 1407
  • [5] Systematic search for gastric cancer-specific genes based on SAGE data: melanoma inhibitory activity and matrix metalloproteinase-10 are novel prognostic factors in patients with gastric cancer
    Aung, PP
    Oue, N
    Mitani, Y
    Nakayama, H
    Yoshida, K
    Noguchi, T
    Bosserhoff, AK
    Yasui, W
    [J]. ONCOGENE, 2006, 25 (17) : 2546 - 2557
  • [6] Development of a toxicological gene array and quantitative assessment of this technology
    Bartosiewicz, M
    Trounstine, M
    Barker, D
    Johnston, R
    Buckpitt, A
    [J]. ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 2000, 376 (01) : 66 - 73
  • [7] Differential hepatic gene expression in a polygenic mouse model with insulin resistance and hyperglycemia: evidence for a combined transcriptional dysregulation of gluconeogenesis and fatty acid synthesis
    Becker, W
    Kluge, R
    Kantner, T
    Linnartz, K
    Korn, M
    Tschank, G
    Plum, L
    Giesen, K
    Joost, HG
    [J]. JOURNAL OF MOLECULAR ENDOCRINOLOGY, 2004, 32 (01) : 195 - 208
  • [8] How dietary arachidonic- and docosahexaenoic-acid rich oils differentially affect the murine hepatic transcriptome
    Berger, Alvin
    Roberts, Matthew A.
    Hoff, Bruce
    [J]. LIPIDS IN HEALTH AND DISEASE, 2006, 5 (1)
  • [9] Serial analysis of gene expression during elongation of the peri-implantation porcine trophectoderm (conceptus)
    Blomberg, LA
    Long, EL
    Sonstegard, TS
    Van Tassell, CP
    Dobrinsky, JR
    Zuelke, KA
    [J]. PHYSIOLOGICAL GENOMICS, 2005, 20 (02) : 188 - 194
  • [10] Hepatic temporal gene expression profiling in Helicobacter hepaticus-infected A/JCr mice
    Boutin, SR
    Rogers, AB
    Shen, Z
    Fry, RC
    Love, JA
    Nambiar, PR
    Suerbaum, S
    Fox, JG
    [J]. TOXICOLOGIC PATHOLOGY, 2004, 32 (06) : 678 - 693