De Novo Deletion of Chromosome 20q13.33 in a Patient with Tracheo-esophageal Fistula, Cardiac Defects and Genitourinary Anomalies Implicates GTPBP5 as a Candidate Gene

被引:23
作者
Solomon, Benjamin D. [1 ]
Pineda-Alvarez, Daniel E. [1 ]
Hadley, Donald W. [2 ]
Keaton, Amelia A. [1 ,3 ]
Agochukwu, Nneamaka B. [1 ]
Raam, Manu S. [1 ,3 ]
Carlson-Donohoe, Hannah E. [1 ]
Kamat, Aparna [4 ]
Chandrasekharappa, Settara C. [4 ]
机构
[1] NHGRI, Med Genet Branch, NIH, Bethesda, MD 20892 USA
[2] NHGRI, Social & Behav Res Branch, NIH, Bethesda, MD 20892 USA
[3] Howard Hughes Med Inst, HHMI NIH Res Scholars Program, Chevy Chase, MD USA
[4] NHGRI, Canc Genet Branch, NIH, Bethesda, MD 20892 USA
基金
美国国家卫生研究院;
关键词
tracheo-esophageal fistula; TE fistula; VACTERL association; 20q13.33; deletion; GTPBP5; RESPIRATORY-CHAIN DEFICIENCY; COPY-NUMBER VARIATION; VACTERL ASSOCIATION; ESOPHAGEAL ATRESIA; LAMININ ALPHA-5; GENOME;
D O I
10.1002/bdra.20821
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
BACKGROUND: Tracheo-esophageal fistula (TEF) with/or without esophageal atresia (EA) is a common congenital malformation that is often accompanied by other anomalies. The causes of this condition are thought to be heterogeneous but are overall not well understood. CASE REPORT: We identified a patient with a TEF/EA, as well as cardiac and genitourinary anomalies, who was found to have a 0.7 Mb de novo deletion of chromosome 20q13.33. One gene within the deleted interval, GTPBP5, is of particular interest as a candidate gene. CONCLUSIONS: GTPBP5 bears further study as a cause of TEF/EA accompanied by other malformations. Birth Defects Research (Part A) 91:862-865, 2011. (C) 2011 Wiley-Liss, Inc.
引用
收藏
页码:862 / 865
页数:4
相关论文
共 20 条
[1]  
DAMIAN MS, 1996, Am J Med Genet, V62, P62
[2]   Etiology of esophageal atresia and tracheoesophageal fistula: Mind the gap"" [J].
De Jong E.M. ;
Felix J.F. ;
De Klein A. ;
Tibboel D. .
Current Gastroenterology Reports, 2010, 12 (3) :215-222
[3]   Chromosomal anomalies in the aetiology of oesophageal atresia-and tracheo-oesophageal fistula [J].
Felix, Janine F. ;
Tibboel, Dick ;
de Klein, Annelies .
EUROPEAN JOURNAL OF MEDICAL GENETICS, 2007, 50 (03) :163-175
[4]   Laminin-511 is an epithelial message promoting dermal papilla development and function during early hair morphogenesis [J].
Gao, Jing ;
DeRouen, Mindy C. ;
Chen, Chih-Hsin ;
Nguyen, Michael ;
Nguyen, Ngon T. ;
Ido, Hiroyuki ;
Harada, Kenji ;
Sekiguchi, Kiyotoshi ;
Morgan, Bruce A. ;
Miner, Jeffery H. ;
Oro, Anthony E. ;
Marinkovich, M. Peter .
GENES & DEVELOPMENT, 2008, 22 (15) :2111-2124
[5]   A genome-wide scalable SNP genotyping assay using microarray technology [J].
Gunderson, KL ;
Steemers, FJ ;
Lee, G ;
Mendoza, LG ;
Chee, MS .
NATURE GENETICS, 2005, 37 (05) :549-554
[6]   Human small G proteins, ObgH1, and ObgH2, participate in the maintenance of mitochondria and nucleolar architectures [J].
Hirano, Yasuhiro ;
Ohniwa, Ryosuke L. ;
Wada, Chieko ;
Yoshimura, Shige H. ;
Takeyasu, Kunio .
GENES TO CELLS, 2006, 11 (11) :1295-1304
[7]   Genotype, haplotype and copy-number variation in worldwide human populations [J].
Jakobsson, Mattias ;
Scholz, Sonja W. ;
Scheet, Paul ;
Gibbs, J. Raphael ;
VanLiere, Jenna M. ;
Fung, Hon-Chung ;
Szpiech, Zachary A. ;
Degnan, James H. ;
Wang, Kai ;
Guerreiro, Rita ;
Bras, Jose M. ;
Schymick, Jennifer C. ;
Hernandez, Dena G. ;
Traynor, Bryan J. ;
Simon-Sanchez, Javier ;
Matarin, Mar ;
Britton, Angela ;
van de Leemput, Joyce ;
Rafferty, Ian ;
Bucan, Maja ;
Cann, Howard M. ;
Hardy, John A. ;
Rosenberg, Noah A. ;
Singleton, Andrew B. .
NATURE, 2008, 451 (7181) :998-1003
[8]   The VACTERL association: lessons from the Sonic hedgehog pathway [J].
Kim, JH ;
Kim, PCW ;
Hui, CC .
CLINICAL GENETICS, 2001, 59 (05) :306-315
[9]   Laminin α5 is required for lobar septation and visceral pleural basement membrane formation in the developing mouse lung [J].
Nguyen, NM ;
Miner, JH ;
Pierce, RA ;
Senior, RM .
DEVELOPMENTAL BIOLOGY, 2002, 246 (02) :231-244
[10]   A hypomorphic mutation in the mouse laminin α5 gene causes polycystic kidney disease [J].
Shannon, M. Brendan ;
Patton, Bruce L. ;
Harvey, Scott J. ;
Miner, Jeffrey H. .
JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2006, 17 (07) :1913-1922