Novel coumarin-based tyrosinase inhibitors discovered by OECD principles-validated QSAR approach from an enlarged, balanced database

被引:24
作者
Le-Thi-Thu, Huong [1 ]
Casanola-Martin, Gerardo M. [1 ,2 ,3 ]
Marrero-Ponce, Yovani [1 ,3 ]
Rescigno, Antonio [4 ]
Saso, Luciano [5 ]
Parmar, Virinder S. [6 ]
Torrens, Francisco [3 ]
Abad, Concepcion [2 ]
机构
[1] Cent Univ Las Villas, Unit Comp Aided Mol Biosilico Discovery & Bioinfo, Fac Chem Pharm, Santa Clara 54830, Villa Clara, Cuba
[2] Univ Valencia, Dept Bioquim & Biol Mol, E-46100 Burjassot, Spain
[3] Univ Valencia, Inst Univ Ciencia Mol, Valencia 46071, Spain
[4] Univ Cagliari, Dipartimento Sci & Tecnol Biomed, I-09042 Monserrato, CA, Italy
[5] Univ Roma La Sapienza, Dept Physiol & Pharmacol, Rome, Italy
[6] Univ Delhi, Dept Chem, Delhi 110007, India
关键词
Tyrosinase inhibitor; TOMOCOMD-CARDD software; Atom-based bilinear index; Linear discriminant analysis; QSAR model; OECD principle; In silico identification; In vitro corroboration; Coumarin; TOMOCOMD-CARDD APPROACH; SUBSTITUTED; 4-METHYLBENZOPYRAN-2-ONES; BIOCHEMICAL-ACTION; DRUG DISCOVERY; IN-SILICO; CLASSIFICATION; MECHANISM; DESCRIPTORS; SIMILARITY; PREDICTION;
D O I
10.1007/s11030-010-9274-1
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The present work is devoted to the development and application of a multi-agent Quantitative Structure-Activity Relationship (QSAR) classification system for tyrosinase inhibitor identification, in which the individual QSAR outputs are the inputs of a fusion approach based on the voting mechanism. The individual models are based on TOMOCOMD-CARDD (TOpological Molecular COMputational Design-Computer Aided Rational Drug Design) atom-based bilinear descriptors and Linear Discriminant Analysis (LDA) on a novel enlarged, balanced database of 1,429 compounds within 701 greatly dissimilar molecules presenting anti-tyrosinase activity. A total of 21 adequate models are obtained taking into account the requirements of the Organization for Economic Cooperation and Development (OECD) principles for QSAR validation and present global accuracies (Q) above 84.50 and 79.27% in the training and test sets, respectively. The resulted fusion system is used for the in silico identification of synthesized coumarin derivatives as novel tyrosinase inhibitors. The 7-hydroxycoumarin (compound C07) shows potent activity for the inhibition of monophenolase activity of mushroom tyrosinase giving a value of inhibition percentage close to 100% in vitro assays, by means of spectrophotometric analysis. The current report could help to shed some clues in the identification of new chemicals that inhibit tyrosinase enzyme, for entering in the pipeline of drug discovery development.
引用
收藏
页码:507 / 520
页数:14
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