Unsupervised Machine Learning Approach for Gene Expression Microarray Data Using Soft Computing Technique

被引:1
|
作者
Rana, Madhurima [1 ]
Vijayeeta, Prachi [1 ]
Kar, Utsav [1 ]
Das, Madhabananda [1 ]
Mishra, B. S. P. [1 ]
机构
[1] KIIT Univ, Bhubaneswar, Orissa, India
来源
PROCEEDINGS OF 3RD INTERNATIONAL CONFERENCE ON ADVANCED COMPUTING, NETWORKING AND INFORMATICS (ICACNI 2015), VOL 1 | 2016年 / 43卷
关键词
Gene expression; Microarray data; Principal component analysis (PCA); Hierarchical clustering (HC); Cat swarm optimization (CSO); CLUSTER-ANALYSIS;
D O I
10.1007/978-81-322-2538-6_51
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Machine learning is a burgeoning technology used for extractions of knowledge from an ocean of data. It has robust binding with optimization and artificial intelligence that delivers theory, methodologies and application domain to the field of statistics and computer science. Machine learning tasks are broadly classified into two groups namely supervised learning and unsupervised learning. The analysis of the unsupervised data requires thorough computational activities using different clustering algorithms. Microarray gene expression data are taken into consideration for cluster regulating genes from non-regulating genes. In our work optimization technique (Cat Swarm Optimization) is used to minimize the number of cluster by evaluating the Euclidean distance among the centroids. A comparative study is being carried out by clustering the regulating genes before optimization and after optimization. In our work Principal component analysis (PCA) is incorporated for dimensionality reduction of vast dataset to ensure qualitative cluster analysis.
引用
收藏
页码:497 / 506
页数:10
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