Exploring the Genomes of Cancer Cells: Progress and Promise

被引:485
作者
Stratton, Michael R. [1 ]
机构
[1] Wellcome Trust Sanger Inst, Cambridge CB10 1SA, England
基金
英国惠康基金;
关键词
KINASE GENE FAMILY; SOMATIC MUTATIONS; HUMAN BREAST; LUNG-CANCER; POLYCYTHEMIA-VERA; FREQUENT MUTATION; INHIBITION; PATTERNS; EVOLUTION; REARRANGEMENT;
D O I
10.1126/science.1204040
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The description and interpretation of genomic abnormalities in cancer cells have been at the heart of cancer research for more than a century. With exhaustive sequencing of cancer genomes across a wide range of human tumors well under way, we are now entering the end game of this mission. In the forthcoming decade, essentially complete catalogs of somatic mutations will be generated for tens of thousands of human cancers. Here, I provide an overview of what these efforts have revealed to date about the origin and behavioral features of cancer cells and how this genomic information is being exploited to improve diagnosis and therapy of the disease.
引用
收藏
页码:1553 / 1558
页数:6
相关论文
共 70 条
[1]   Genetic variegation of clonal architecture and propagating cells in leukaemia [J].
Anderson, Kristina ;
Lutz, Christoph ;
van Delft, Frederik W. ;
Bateman, Caroline M. ;
Guo, Yanping ;
Colman, Susan M. ;
Kempski, Helena ;
Moorman, Anthony V. ;
Titley, Ian ;
Swansbury, John ;
Kearney, Lyndal ;
Enver, Tariq ;
Greaves, Mel .
NATURE, 2011, 469 (7330) :356-+
[2]   Mutational analysis of the tyrosine kinome in colorectal cancers [J].
Bardelli, A ;
Parsons, DW ;
Silliman, N ;
Ptak, J ;
Szabo, S ;
Saha, S ;
Markowitz, S ;
Willson, JKV ;
Parmigiani, G ;
Kinzler, KW ;
Vogelstein, B ;
Velculescu, VE .
SCIENCE, 2003, 300 (5621) :949-949
[3]   Signatures of mutation and selection in the cancer genome [J].
Bignell, Graham R. ;
Greenman, Chris D. ;
Davies, Helen ;
Butler, Adam P. ;
Edkins, Sarah ;
Andrews, Jenny M. ;
Buck, Gemma ;
Chen, Lina ;
Beare, David ;
Latimer, Calli ;
Widaa, Sara ;
Hinton, Jonathon ;
Fahey, Ciara ;
Fu, Beiyuan ;
Swamy, Sajani ;
Dalgliesh, Gillian L. ;
Teh, Bin T. ;
Deloukas, Panos ;
Yang, Fengtang ;
Campbell, Peter J. ;
Futreal, P. Andrew ;
Stratton, Michael R. .
NATURE, 2010, 463 (7283) :893-U61
[4]   Genetic instability is not a requirement for tumor development [J].
Bodmer, Walter .
CANCER RESEARCH, 2008, 68 (10) :3558-3560
[5]   Subclonal phylogenetic structures in cancer revealed by ultra-deep sequencing [J].
Campbell, Peter J. ;
Pleasance, Erin D. ;
Stephens, Philip J. ;
Dicks, Ed ;
Rance, Richard ;
Goodhead, Ian ;
Follows, George A. ;
Green, Anthony R. ;
Futreal, P. Andy ;
Stratton, Michael R. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (35) :13081-13086
[6]   The patterns and dynamics of genomic instability in metastatic pancreatic cancer [J].
Campbell, Peter J. ;
Yachida, Shinichi ;
Mudie, Laura J. ;
Stephens, Philip J. ;
Pleasance, Erin D. ;
Stebbings, Lucy A. ;
Morsberger, Laura A. ;
Latimer, Calli ;
McLaren, Stuart ;
Lin, Meng-Lay ;
McBride, David J. ;
Varela, Ignacio ;
Nik-Zainal, Serena A. ;
Leroy, Catherine ;
Jia, Mingming ;
Menzies, Andrew ;
Butler, Adam P. ;
Teague, Jon W. ;
Griffin, Constance A. ;
Burton, John ;
Swerdlow, Harold ;
Quail, Michael A. ;
Stratton, Michael R. ;
Iacobuzio-Donahue, Christine ;
Futreal, P. Andrew .
NATURE, 2010, 467 (7319) :1109-1113
[7]   Comprehensive genomic characterization defines human glioblastoma genes and core pathways [J].
Chin, L. ;
Meyerson, M. ;
Aldape, K. ;
Bigner, D. ;
Mikkelsen, T. ;
VandenBerg, S. ;
Kahn, A. ;
Penny, R. ;
Ferguson, M. L. ;
Gerhard, D. S. ;
Getz, G. ;
Brennan, C. ;
Taylor, B. S. ;
Winckler, W. ;
Park, P. ;
Ladanyi, M. ;
Hoadley, K. A. ;
Verhaak, R. G. W. ;
Hayes, D. N. ;
Spellman, Paul T. ;
Absher, D. ;
Weir, B. A. ;
Ding, L. ;
Wheeler, D. ;
Lawrence, M. S. ;
Cibulskis, K. ;
Mardis, E. ;
Zhang, Jinghui ;
Wilson, R. K. ;
Donehower, L. ;
Wheeler, D. A. ;
Purdom, E. ;
Wallis, J. ;
Laird, P. W. ;
Herman, J. G. ;
Schuebel, K. E. ;
Weisenberger, D. J. ;
Baylin, S. B. ;
Schultz, N. ;
Yao, Jun ;
Wiedemeyer, R. ;
Weinstein, J. ;
Sander, C. ;
Gibbs, R. A. ;
Gray, J. ;
Kucherlapati, R. ;
Lander, E. S. ;
Myers, R. M. ;
Perou, C. M. ;
McLendon, Roger .
NATURE, 2008, 455 (7216) :1061-1068
[8]   Systematic sequencing of renal carcinoma reveals inactivation of histone modifying genes [J].
Dalgliesh, Gillian L. ;
Furge, Kyle ;
Greenman, Chris ;
Chen, Lina ;
Bignell, Graham ;
Butler, Adam ;
Davies, Helen ;
Edkins, Sarah ;
Hardy, Claire ;
Latimer, Calli ;
Teague, Jon ;
Andrews, Jenny ;
Barthorpe, Syd ;
Beare, Dave ;
Buck, Gemma ;
Campbell, Peter J. ;
Forbes, Simon ;
Jia, Mingming ;
Jones, David ;
Knott, Henry ;
Kok, Chai Yin ;
Lau, King Wai ;
Leroy, Catherine ;
Lin, Meng-Lay ;
McBride, David J. ;
Maddison, Mark ;
Maguire, Simon ;
McLay, Kirsten ;
Menzies, Andrew ;
Mironenko, Tatiana ;
Mulderrig, Lee ;
Mudie, Laura ;
O'Meara, Sarah ;
Pleasance, Erin ;
Rajasingham, Arjunan ;
Shepherd, Rebecca ;
Smith, Raffaella ;
Stebbings, Lucy ;
Stephens, Philip ;
Tang, Gurpreet ;
Tarpey, Patrick S. ;
Turrell, Kelly ;
Dykema, Karl J. ;
Khoo, Sok Kean ;
Petillo, David ;
Wondergem, Bill ;
Anema, John ;
Kahnoski, Richard J. ;
Teh, Bin Tean ;
Stratton, Michael R. .
NATURE, 2010, 463 (7279) :360-363
[9]   Somatic mutations of the protein kinase gene family in human lung cancer [J].
Davies, H ;
Hunter, C ;
Smith, R ;
Stephens, P ;
Greenman, C ;
Bignell, G ;
Teague, B ;
Butler, A ;
Edkins, S ;
Stevens, C ;
Parker, A ;
O'Meara, S ;
Avis, T ;
Barthorpe, S ;
Brackenbury, L ;
Buck, G ;
Clements, B ;
Cole, J ;
Dicks, E ;
Edwards, K ;
Forbes, S ;
Gorton, M ;
Gray, K ;
Halliday, K ;
Harrison, R ;
Hills, K ;
Hinton, J ;
Jones, D ;
Kosmidou, V ;
Laman, R ;
Lugg, R ;
Menzies, A ;
Perry, J ;
Petty, R ;
Raine, K ;
Shepherd, R ;
Small, A ;
Solomon, H ;
Stephens, Y ;
Tofts, C ;
Varian, J ;
Webb, A ;
West, S ;
Widaa, S ;
Yates, A ;
Brasseur, F ;
Cooper, CS ;
Flanagan, AM ;
Green, A ;
Knowles, M .
CANCER RESEARCH, 2005, 65 (17) :7591-7595
[10]   Mutations of the BRAF gene in human cancer [J].
Davies, H ;
Bignell, GR ;
Cox, C ;
Stephens, P ;
Edkins, S ;
Clegg, S ;
Teague, J ;
Woffendin, H ;
Garnett, MJ ;
Bottomley, W ;
Davis, N ;
Dicks, N ;
Ewing, R ;
Floyd, Y ;
Gray, K ;
Hall, S ;
Hawes, R ;
Hughes, J ;
Kosmidou, V ;
Menzies, A ;
Mould, C ;
Parker, A ;
Stevens, C ;
Watt, S ;
Hooper, S ;
Wilson, R ;
Jayatilake, H ;
Gusterson, BA ;
Cooper, C ;
Shipley, J ;
Hargrave, D ;
Pritchard-Jones, K ;
Maitland, N ;
Chenevix-Trench, G ;
Riggins, GJ ;
Bigner, DD ;
Palmieri, G ;
Cossu, A ;
Flanagan, A ;
Nicholson, A ;
Ho, JWC ;
Leung, SY ;
Yuen, ST ;
Weber, BL ;
Siegler, HF ;
Darrow, TL ;
Paterson, H ;
Marais, R ;
Marshall, CJ ;
Wooster, R .
NATURE, 2002, 417 (6892) :949-954