Minimal nanodisc without exogenous lipids for stabilizing membrane proteins in detergent-free buffer

被引:4
作者
Salvador, Dimitri [1 ,2 ]
Glavier, Marie [1 ,2 ]
Schoehn, Guy [3 ]
Phan, Gilles [4 ]
Taveau, Jean-Christophe [1 ,2 ]
Decossas, Marion [1 ,2 ]
Lecomte, Sophie [1 ,2 ]
Mongrand, Sebastien [5 ]
Garnier, Cyril [4 ]
Broutin, Isabelle [4 ]
Daury, Laetitia [1 ,2 ]
Lambert, Olivier [1 ,2 ]
机构
[1] Univ Bordeaux, Bordeaux INP, CBMN, UMR 5248, F-33600 Pessac, France
[2] CNRS, UMR5248, CBMN, F-33600 Pessac, France
[3] Univ Grenoble Alpes, CNRS, CEA, Inst Struct Biol IBS, F-38000 Grenoble, France
[4] Univ Paris 05, Fac Pharm, Lab Cristallog & RMN Biol, CNRS,UMR 8015, 4 Ave Observ, F-75006 Paris, France
[5] Univ Bordeaux, CNRS, UMR 5200, Lab Biogenese Membranaire, 71 Ave Edouard Bourlaux, F-33883 Villenave Dornon, France
来源
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES | 2019年 / 1861卷 / 04期
关键词
Membrane protein; Nanodisc; Lipids; CryoEM; PSEUDOMONAS-AERUGINOSA; CRYSTAL-STRUCTURE; RECONSTITUTION; PEPTIDES; MEXB; OPRM;
D O I
10.1016/j.bbamem.2019.01.013
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Membrane protein stabilization after detergent solubilization presents drawbacks for structural and biophysical studies, in particular that of a reduced stability in detergent micelles. Therefore, alternative methods are required for efficient stabilization. Lipid nanodisc made with the membrane scaffold protein MSP is a valuable system but requires a fine optimization of the lipid to protein ratio. We present here the use of the scaffold protein MSP without added lipids as a minimal system to stabilize membrane proteins. We show that this method is applicable to alpha-helical and beta-strands transmembrane proteins. This method allowed cryo-electron microscopy structural study of the bacterial transporter MexB. A protein quantification indicates that MexB is stabilized by two MSP proteins. This simplified and efficient method proposes a new advance in harnessing the MSP potential to stabilize membrane proteins.
引用
收藏
页码:852 / 860
页数:9
相关论文
共 31 条
[1]   Crystal structure of the drug discharge outer membrane protein, OprM, of Pseudomonas aeruginosa -: Dual modes of membrane anchoring and occluded cavity end [J].
Akama, H ;
Kanemaki, M ;
Yoshimura, M ;
Tsukihara, T ;
Kashiwagi, T ;
Yoneyama, H ;
Narita, S ;
Nakagawa, A ;
Nakae, T .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (51) :52816-52819
[2]   Reconstitution and imaging of a membrane protein in a nanometer-size phospholipid bilayer [J].
Bayburt, TH ;
Carlson, JW ;
Sligar, SG .
JOURNAL OF STRUCTURAL BIOLOGY, 1998, 123 (01) :37-44
[3]   Assembly of single bacteriorhodopsin trimers in bilayer nanodiscs [J].
Bayburt, Timothy H. ;
Grinkova, Yelena V. ;
Sligar, Stephen G. .
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 2006, 450 (02) :215-222
[4]   Solution structure of discoidal high-density lipoprotein particles with a shortened apolipoprotein A-I [J].
Bibow, Stefan ;
Polyhach, Yevhen ;
Eichmann, Cedric ;
Chi, Celestine N. ;
Kowal, Julia ;
Albiez, Stefan ;
McLeod, Robert A. ;
Stahlberg, Henning ;
Jeschke, Gunnar ;
Guntert, Peter ;
Riek, Roland .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2017, 24 (02) :187-+
[5]   The Peptidisc, a simple method for stabilizing membrane proteins in detergent-free solution [J].
Carlson, Michael Luke ;
Young, John William ;
Zhao, Zhiyu ;
Fabre, Lucien ;
Jun, Daniel ;
Li, Jianing ;
Li, Jun ;
Dhupar, Harveer Singh ;
Wason, Irvin ;
Mills, Allan T. ;
Beatty, J. Thomas ;
Klassen, John S. ;
Rouiller, Isabelle ;
Duong, Franck .
ELIFE, 2018, 7
[6]  
Daury L, 2017, METHODS MOL BIOL, V1635, P317, DOI 10.1007/978-1-4939-7151-0_17
[7]   Tripartite assembly of RND multidrug efflux pumps [J].
Daury, Laetitia ;
Orange, Francois ;
Taveau, Jean-Christophe ;
Verchere, Alice ;
Monlezun, Laura ;
Gounou, Celine ;
Marreddy, Ravi K. R. ;
Picard, Martin ;
Broutin, Isabelle ;
Pos, Klaas M. ;
Lambert, Olivier .
NATURE COMMUNICATIONS, 2016, 7
[8]   Nanodiscs in Membrane Biochemistry and Biophysics [J].
Denisov, Ilia G. ;
Sligari, Stephen G. .
CHEMICAL REVIEWS, 2017, 117 (06) :4669-4713
[9]   Architecture and conformational switch mechanism of the ryanodine receptor [J].
Efremov, Rouslan G. ;
Leitner, Alexander ;
Aebersold, Ruedi ;
Raunser, Stefan .
NATURE, 2015, 517 (7532) :39-U72
[10]   Amphipol-Mediated Screening of Molecular Orthoses Specific for Membrane Protein Targets [J].
Ferrandez, Yann ;
Dezi, Manuela ;
Bosco, Mickael ;
Urvoas, Agathe ;
Valerio-Lepiniec, Marie ;
Le Bon, Christel ;
Giusti, Fabrice ;
Broutin, Isabelle ;
Durand, Gregory ;
Polidori, Ange ;
Popot, Jean-Luc ;
Picard, Martin ;
Minard, Philippe .
JOURNAL OF MEMBRANE BIOLOGY, 2014, 247 (9-10) :925-940