Complete mitochondrial genome of the Grey thrush Turdus cardis (Aves, Turdidae)

被引:3
作者
Sun, Cheng-He [1 ]
Xu, Peng [1 ]
Lu, Cai-Hong [1 ]
Han, Qian [1 ]
Lin, Yuan-Feng [1 ]
Gao, Zi-Jing [1 ]
Lu, Chang-Hu [1 ]
机构
[1] Nanjing Forestry Univ, Coll Biol & Environm, Nanjing, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 02期
关键词
Turdus cardis; mitogenome; phylogenetics;
D O I
10.1080/23802359.2020.1750996
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The mitogenome was sequenced through whole-genome shotgun sequencing using the Illumina platform, and phylogenetic analysis was carried out on the basis of 13 PCGs and two rRNAs. The complete T. cardis mitogenome comprised 16,761 bp, MN865118. The organization and location of genes in the T. cardis mitogenome were consistent with those reported for other Turdidae species. Phylogenetic relationships based on Bayesian inference and the Maximum likelihood method revealed that T. cardis was closely related to Turdus hortulorum, indicating that the molecular taxonomy of T. cardis is consistent with its current morphological characteristics. Our mitogenomic data may have applications in further phylogenetic and taxonomic studies of Turdidae.
引用
收藏
页码:1824 / 1825
页数:2
相关论文
共 8 条
[1]  
[Anonymous], J YAMASHINA I ORNITH
[2]   Two new mitogenomes of Picidae (Ayes, Piciformes): Sequence, structure and phylogenetic analyses [J].
Bi, De ;
Ding, Hengwu ;
Wang, Qingqing ;
Jiang, Lan ;
Lu, Wenkong ;
Wu, Xuan ;
Zhu, Ran ;
Zeng, Juhua ;
Zhou, Shoubiao ;
Yang, Xiaojun ;
Kan, Xianzhao .
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2019, 133 :683-692
[3]   The complete sequence of the mitochondrial genome of Buteo buteo (Aves, Accipitridae) indicates an early split in the phylogeny of raptors [J].
Haring, E ;
Kruckenhauser, L ;
Gamauf, A ;
Riesing, MJ ;
Pinsker, W .
MOLECULAR BIOLOGY AND EVOLUTION, 2001, 18 (10) :1892-1904
[4]   Characterization of the complete mitochondrial genome of the Rock pigeon, Columba livia (Columbiformes: Columbidae) [J].
Kan, X. Z. ;
Li, X. F. ;
Zhang, L. Q. ;
Chen, L. ;
Qian, C. J. ;
Zhang, X. W. ;
Wang, L. .
GENETICS AND MOLECULAR RESEARCH, 2010, 9 (02) :1234-1249
[5]   The complete mitochondrial genome of the Fischer's Lovebird Agapornis fischeri (Psittaciformes: Psittacidae) [J].
Liu, Hongyi ;
Jin, Ke ;
Li, Lin .
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01) :1217-1218
[6]   Bidirectional replication initiates at sites throughout the mitochondrial genome of birds [J].
Reyes, A ;
Yang, MY ;
Bowmaker, M ;
Holt, IJ .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (05) :3242-3250
[7]   Five new mitogenomes of Phylloscopus (Passeriformes, Phylloscopidae): Sequence, structure, and phylogenetic analyses [J].
Sun, Cheng-He ;
Liu, Hong-Yi ;
Lu, Chang-Hu .
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2020, 146 :638-647
[8]   Complete mitochondrial genome of the Siberian thrush, Geokichla sibirica sibirica (Aves, Turdidae) [J].
Sun, Cheng-He ;
Liu, Bin ;
Lu, Chang-Hu .
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01) :1150-1151