Selective inhibition of ammonia oxidising archaea by simvastatin stimulates growth of ammonia oxidising bacteria

被引:50
作者
Zhao, Jun [1 ,2 ]
Bello, Marcus O. [1 ,3 ]
Meng, Yiyu [1 ]
Prosser, James I. [1 ]
Gubry-Rangin, Cecile [1 ]
机构
[1] Univ Aberdeen, Sch Biol Sci, Cruickshank Bldg,St Machar Dr, Aberdeen AB24 3UU, Scotland
[2] Univ Florida, Dept Microbiol & Cell Sci, IFAS, 3205 Coll Ave, Ft Lauderdale Davie, FL 33314 USA
[3] Adekunle Ajasin Univ Akungba Akoko, Fac Sci, Dept Microbiol, Akungba, Nigeria
基金
英国自然环境研究理事会;
关键词
Activity; Nitrification; Inhibitor; Ammonia; Thaumarchaeota; Stable isotope probing; LOW PH; NITROSOSPHAERA-VIENNENSIS; COMPLETE NITRIFICATION; NITROSOMONAS-EUROPAEA; NICHE SPECIALIZATION; COMMUNITY STRUCTURE; FOREST SOILS; NITRIC-OXIDE; OXIDATION; NITROGEN;
D O I
10.1016/j.soilbio.2019.107673
中图分类号
S15 [土壤学];
学科分类号
0903 ; 090301 ;
摘要
The desire to understand and distinguish the relative growth and activity of ammonia oxidising archaea (AOA) and ammonia oxidising bacteria (AOB) in soil nitrification has increased the search for selective inhibitors of these two groups. This study aimed to investigate the potency and specificity of simvastatin as a specific AOA inhibitor in pure cultures and in soil and to determine the effect of AOA inhibition on both ammonia oxidation activity and growth of AOB, under the hypothesis that AOB growth is higher when competition for NH4+ from AOA is removed. Simvastatin selectively inhibited pure cultures of all tested AOA at concentrations of 8-100 mu M. In soil microcosms incubated for 21 days with low and high NH4+ concentrations, AOA but not AOB were selectively inhibited by simvastatin in both acidic (pH 4.5) and near-neutral (pH 6.5) soils. Additionally, growth of AOB significantly increased at both NH4+ concentrations following inhibition of AOA by simvastatin, suggesting that competition for substrate between AOA and AOB is a key factor restraining AOB growth in NW-limited soils. Simvastatin can therefore be used as a selective AOA inhibitor to investigate kinetic characteristics of AOB in soils and to study competition between AOA and AOB in complex environments.
引用
收藏
页数:8
相关论文
共 76 条
  • [51] Low nitrification rates in acid scots pine forest soils are due to pH-related factors
    Nugroho, R. A.
    Roling, W. F. M.
    Laverman, A. M.
    Verhoef, H. A.
    [J]. MICROBIAL ECOLOGY, 2007, 53 (01) : 89 - 97
  • [52] Growth of ammonia-oxidizing archaea in soil microcosms is inhibited by acetylene
    Offre, Pierre
    Prosser, James I.
    Nicol, Graeme W.
    [J]. FEMS MICROBIOLOGY ECOLOGY, 2009, 70 (01) : 99 - 108
  • [53] Abundance of microbial genes associated with nitrogen cycling as indices of biogeochemical process rates across a vegetation gradient in Alaska
    Petersen, Dorthe Groth
    Blazewicz, Steven J.
    Firestone, Mary
    Herman, Donald J.
    Turetsky, Merritt
    Waldrop, Mark
    [J]. ENVIRONMENTAL MICROBIOLOGY, 2012, 14 (04) : 993 - 1008
  • [54] AmoA-Targeted Polymerase Chain Reaction Primers for the Specific Detection and Quantification of Comammox Nitrospira in the Environment
    Pjevac, Petra
    Schauberger, Clemens
    Poghosyan, Lianna
    Herbold, Craig W.
    van Kessel, Maartje A. H. J.
    Daebeler, Anne
    Steinberger, Michaela
    Jetten, Mike S. M.
    Luecker, Sebastian
    Wagner, Michael
    Daims, Holger
    [J]. FRONTIERS IN MICROBIOLOGY, 2017, 8
  • [55] Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation
    Prosser, James I.
    Nicol, Graeme W.
    [J]. TRENDS IN MICROBIOLOGY, 2012, 20 (11) : 523 - 531
  • [56] The ammonia monooxygenase structural gene amoA as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations
    Rotthauwe, JH
    Witzel, KP
    Liesack, W
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1997, 63 (12) : 4704 - 4712
  • [57] The effect of nitrification inhibitors on the nitrous oxide (N2O) release from agricultural soils-a review
    Ruser, Reiner
    Schulz, Rudolf
    [J]. JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE, 2015, 178 (02) : 171 - 188
  • [58] Cultivation and characterization of Candidatus Nitrosocosmicus exaquare, an ammonia-oxidizing archaeon from a municipal wastewater treatment system
    Sauder, Laura A.
    Albertsen, Mads
    Engel, Katja
    Schwarz, Jasmin
    Nielsen, Per H.
    Wagner, Michael
    Neufeld, Josh D.
    [J]. ISME JOURNAL, 2017, 11 (05) : 1142 - 1157
  • [59] Nitric oxide scavengers differentially inhibit ammonia oxidation in ammonia-oxidizing archaea and bacteria
    Sauder, Laura A.
    Ross, Ashley A.
    Neufeld, Josh D.
    [J]. FEMS MICROBIOLOGY LETTERS, 2016, 363 (07)
  • [60] Schouten S, 2013, ORG GEOCHEM, V54, P19, DOI [10.1016/j.orggeochem.2012.09.006, 10.1016/j.orggeochem.2012.07.004]