Selective inhibition of ammonia oxidising archaea by simvastatin stimulates growth of ammonia oxidising bacteria

被引:50
作者
Zhao, Jun [1 ,2 ]
Bello, Marcus O. [1 ,3 ]
Meng, Yiyu [1 ]
Prosser, James I. [1 ]
Gubry-Rangin, Cecile [1 ]
机构
[1] Univ Aberdeen, Sch Biol Sci, Cruickshank Bldg,St Machar Dr, Aberdeen AB24 3UU, Scotland
[2] Univ Florida, Dept Microbiol & Cell Sci, IFAS, 3205 Coll Ave, Ft Lauderdale Davie, FL 33314 USA
[3] Adekunle Ajasin Univ Akungba Akoko, Fac Sci, Dept Microbiol, Akungba, Nigeria
基金
英国自然环境研究理事会;
关键词
Activity; Nitrification; Inhibitor; Ammonia; Thaumarchaeota; Stable isotope probing; LOW PH; NITROSOSPHAERA-VIENNENSIS; COMPLETE NITRIFICATION; NITROSOMONAS-EUROPAEA; NICHE SPECIALIZATION; COMMUNITY STRUCTURE; FOREST SOILS; NITRIC-OXIDE; OXIDATION; NITROGEN;
D O I
10.1016/j.soilbio.2019.107673
中图分类号
S15 [土壤学];
学科分类号
0903 ; 090301 ;
摘要
The desire to understand and distinguish the relative growth and activity of ammonia oxidising archaea (AOA) and ammonia oxidising bacteria (AOB) in soil nitrification has increased the search for selective inhibitors of these two groups. This study aimed to investigate the potency and specificity of simvastatin as a specific AOA inhibitor in pure cultures and in soil and to determine the effect of AOA inhibition on both ammonia oxidation activity and growth of AOB, under the hypothesis that AOB growth is higher when competition for NH4+ from AOA is removed. Simvastatin selectively inhibited pure cultures of all tested AOA at concentrations of 8-100 mu M. In soil microcosms incubated for 21 days with low and high NH4+ concentrations, AOA but not AOB were selectively inhibited by simvastatin in both acidic (pH 4.5) and near-neutral (pH 6.5) soils. Additionally, growth of AOB significantly increased at both NH4+ concentrations following inhibition of AOA by simvastatin, suggesting that competition for substrate between AOA and AOB is a key factor restraining AOB growth in NW-limited soils. Simvastatin can therefore be used as a selective AOA inhibitor to investigate kinetic characteristics of AOB in soils and to study competition between AOA and AOB in complex environments.
引用
收藏
页数:8
相关论文
共 76 条
  • [1] An evaluated improvement of the extinction dilution method for isolation of ammonia-oxidizing bacteria
    Aakra, Å
    Utåker, JB
    Nes, IF
    Bakken, LR
    [J]. JOURNAL OF MICROBIOLOGICAL METHODS, 1999, 39 (01) : 23 - 31
  • [2] The application of high-throughput sequencing technology to analysis of amoA phylogeny and environmental niche specialisation of terrestrial bacterial ammonia-oxidisers
    Aigle, Axel
    Prosser, James I.
    Gubry-Rangin, Cecile
    [J]. ENVIRONMENTAL MICROBIOME, 2019, 14 (01)
  • [3] UREASE ACTIVITY IN NEUTROPHILIC AUTOTROPHIC AMMONIA-OXIDIZING BACTERIA ISOLATED FROM ACID SOILS
    ALLISON, SM
    PROSSER, JI
    [J]. SOIL BIOLOGY & BIOCHEMISTRY, 1991, 23 (01) : 45 - 51
  • [4] Autotrophic ammonia oxidation at low pH through urea hydrolysis
    Burton, SAQ
    Prosser, JI
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2001, 67 (07) : 2952 - 2957
  • [5] CABRERA JA, 1986, J BIOL CHEM, V261, P3578
  • [6] Nitric oxide is an obligate bacterial nitrification intermediate produced by hydroxylamine oxidoreductase
    Caranto, Jonathan D.
    Lancaster, Kyle M.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 114 (31) : 8217 - 8222
  • [7] Nitrosomonas europaea-like bacteria detected as the dominant β-subclass Proteobacteria ammonia oxidisers in reference and limed acid forest soils
    Carnol, M
    Kowalchuk, GA
    De Boer, W
    [J]. SOIL BIOLOGY & BIOCHEMISTRY, 2002, 34 (07) : 1047 - 1050
  • [8] Complete nitrification by Nitrospira bacteria
    Daims, Holger
    Lebedeva, Elena V.
    Pjevac, Petra
    Han, Ping
    Herbold, Craig
    Albertsen, Mads
    Jehmlich, Nico
    Palatinszky, Marton
    Vierheilig, Julia
    Bulaev, Alexandr
    Kirkegaard, Rasmus H.
    von Bergen, Martin
    Rattei, Thomas
    Bendinger, Bernd
    Nielsen, Per H.
    Wagner, Michael
    [J]. NATURE, 2015, 528 (7583) : 504 - +
  • [9] AMMONIUM-OXIDATION AT LOW PH BY A CHEMOLITHOTROPHIC BACTERIUM BELONGING TO THE GENUS NITROSOSPIRA
    DEBOER, W
    GUNNEWIEK, PAK
    LAANBROEK, HJ
    [J]. SOIL BIOLOGY & BIOCHEMISTRY, 1995, 27 (02) : 127 - 132
  • [10] UREOLYTIC NITRIFICATION AT LOW PH BY NITROSOSPIRA SPEC
    DEBOER, W
    LAANBROEK, HJ
    [J]. ARCHIVES OF MICROBIOLOGY, 1989, 152 (02) : 178 - 181