IMG/M: a data management and analysis system for metagenomes

被引：208

作者：

Markowitz, Victor M. ^{[1
]}

Ivanova, Natalia N. ^{[4
]}

Szeto, Ernest ^{[1
]}

Palaniappan, Krishna ^{[1
]}

Chu, Ken ^{[1
]}

Dalevi, Daniel ^{[1
]}

Chen, I-Min A. ^{[1
]}

Grechkin, Yuri ^{[1
]}

Dubchak, Inna ^{[2
]}

Anderson, Iain ^{[4
]}

Lykidis, Athanasios ^{[4
]}

Mavromatis, Konstantinos ^{[4
]}

Hugenholtz, Philip ^{[3
]}

Kyrpides, Nikos C. ^{[4
]}

机构：

[1] Univ Calif Berkeley, Lawrence Berkeley Lab, Biol Data Management & Technol Ctr, Berkeley, CA 94720 USA

[2] Univ Calif Berkeley, Lawrence Berkeley Lab, Genome Div, Berkeley, CA 94720 USA

[3] Joint Genome Inst, Microbial Ecol Program, Dept Energy, Walnut Creek, CA USA

[4] Joint Genome Inst, Genome Biol Program, Dept Energy, Walnut Creek, CA USA

来源：

NUCLEIC ACIDS RESEARCH | 2008年 / 36卷

关键词：

D O I：

10.1093/nar/gkm869

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

IMG/M is a data management and analysis system for microbial community genomes (metagenomes) hosted at the Department of Energys (DOE) Joint Genome Institute (JGI). IMG/M consists of metagenome data integrated with isolate microbial genomes from the Integrated Microbial Genomes (IMG) system. IMG/M provides IMGs comparative data analysis tools extended to handle metagenome data, together with metagenome-specific analysis tools. IMG/M is available at http://img.jgi.doe.gov/m.

引用

页码：D534 / D538

页数：5

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