Data Descriptor: Chemotactic responses of growing neurites to precisely controlled gradients of nerve growth factor

被引:6
作者
Bicknell, Brendan A. [1 ,2 ]
Pujic, Zac [1 ]
Feldner, Julia [1 ]
Vetter, Irina [1 ,3 ,4 ]
Goodhill, Geoffrey J. [1 ,2 ]
机构
[1] Univ Queensland, Queensland Brain Inst, St Lucia, Qld 4072, Australia
[2] Univ Queensland, Sch Math & Phys, St Lucia, Qld 4072, Australia
[3] Univ Queensland, Inst Mol Biosci, Brisbane, Qld 4072, Australia
[4] Univ Queensland, Sch Pharm, Brisbane, Qld 4072, Australia
基金
澳大利亚研究理事会; 英国医学研究理事会;
关键词
AXON GUIDANCE; MOLECULAR GRADIENTS; BIOLOGY; BRAIN;
D O I
10.1038/sdata.2018.183
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Chemotaxis plays a key role in many biological systems. In particular in the context of the developing nervous system, growing neurites can respond in vitro to shallow gradients of chemotropic molecules such as nerve growth factor (NGF). However, in such studies the gradient parameters are often not well controlled. Here we present a dataset of similar to 3500 images of early postnatal rat dorsal root ganglion (DRG) explants growing in 40 different precisely controlled combinations of absolute concentration and gradient steepness of NGF. Each image has been segmented into neurite and explant-body regions. We provide computer code for exploration and quantification of the data, including a Fourier analysis of the outer contour of neurite growth, which allows quantities such as outgrowth and guidance as a function of concentration and gradient steepness to be easily extracted. This is the most comprehensive quantitative dataset of chemotactic responses yet available for any biological system, which we hope will be useful for exploring the biological mechanisms governing chemotaxis.
引用
收藏
页数:7
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