Regulated RNA stability in the Gram positives

被引:40
作者
Condon, Ciaran [2 ]
Bechhofer, David H. [1 ]
机构
[1] Mt Sinai Sch Med, Dept Pharmacol & Syst Therapeut, New York, NY 10029 USA
[2] Univ Paris 07, CNRS, Inst Biol Physicochim, UPR 9073, F-75005 Paris, France
基金
美国国家卫生研究院;
关键词
BINDING ATTENUATION PROTEIN; GROUP-A STREPTOCOCCUS; TRP LEADER RNA; MESSENGER-RNA; BACILLUS-SUBTILIS; ESCHERICHIA-COLI; GENE-EXPRESSION; STREPTOMYCES-COELICOLOR; RIBONUCLEASES J1; IN-VITRO;
D O I
10.1016/j.mib.2011.01.010
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Regulation of bacterial gene expression at the post-transcriptional level has emerged as a major control mechanism, although not yet as well recognized as the mechanisms of control at the transcriptional level. In this article, we focus on regulated RNA decay in the control of gene expression in Gram-positive organisms, with an emphasis on Bacillus subtilis. Discovery of new ribonuclease activities in B. subtilis and other Gram-positive species, especially the dual-functioning RNase J1, which specifies both an endonuclease activity and the long-sought bacterial 5'-to-3' exoribonuclease activity, has led to the recognition of intriguing mechanisms of gene regulation at the level of RNA decay.
引用
收藏
页码:148 / 154
页数:7
相关论文
共 52 条
[1]   Regulation of tryptophan biosynthesis: Trp-ing the TRAP or how Bacillus subtilis reinvented the wheel [J].
Babitzke, P .
MOLECULAR MICROBIOLOGY, 1997, 26 (01) :1-9
[2]   AUTO-REGULATION OF RNASE-III OPERON BY MESSENGER-RNA PROCESSING [J].
BARDWELL, JCA ;
REGNIER, P ;
CHEN, SM ;
NAKAMURA, Y ;
GRUNBERGMANAGO, M ;
COURT, DL .
EMBO JOURNAL, 1989, 8 (11) :3401-3407
[3]   Role of mRNA stability in growth phase regulation of gene expression in the group A streptococcus [J].
Barnett, Timothy C. ;
Bugrysheva, Julia V. ;
Scott, June R. .
JOURNAL OF BACTERIOLOGY, 2007, 189 (05) :1866-1873
[4]   Kinetic and thermodynamic analysis of the interaction between TRAP (trp RNA-binding attenuation protein) of Bacillus subtilis and trp leader RNA [J].
Baumann, C ;
Otridge, J ;
Gollnick, P .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1996, 271 (21) :12269-12274
[5]   Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays [J].
Bernstein, JA ;
Khodursky, AB ;
Lin, PH ;
Lin-Chao, S ;
Cohen, SN .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (15) :9697-9702
[6]   The ribonucleases J1 and J2 are essential for growth and have independent roles in mRNA decay in Streptococcus pyogenes [J].
Bugrysheva, Julia V. ;
Scott, June R. .
MOLECULAR MICROBIOLOGY, 2010, 75 (03) :731-743
[7]   Autogenous Regulation of Escherichia coli Polynucleotide Phosphorylase Expression Revisited [J].
Carzaniga, Thomas ;
Briani, Federica ;
Zangrossi, Sandro ;
Merlino, Giuseppe ;
Marchi, Paolo ;
Deho, Gianni .
JOURNAL OF BACTERIOLOGY, 2009, 191 (06) :1738-1748
[8]   Initiation of RNA decay in Escherichia coli by 5′ pyrophosphate removal [J].
Celesnik, Helena ;
Deana, Atilio ;
Belasco, Joel G. .
MOLECULAR CELL, 2007, 27 (01) :79-90
[9]   Ago-TNRC6 triggers microRNA-mediated decay by promoting two deadenylation steps [J].
Chen, Chyi-Ying A. ;
Zheng, Dinghai ;
Xia, Zhenfang ;
Shyu, Ann-Bin .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2009, 16 (11) :1160-U6
[10]   Mechanism of mRNA destabilization by the glmS ribozyme [J].
Collins, Jennifer A. ;
Irnov, Irnov ;
Baker, Stephanie ;
Winkler, Wade C. .
GENES & DEVELOPMENT, 2007, 21 (24) :3356-3368