Multi-Step Concanavalin A Phase Separation and Early-Stage Nucleation Monitored Via Dynamic and Depolarized Light Scattering

被引:8
作者
Brognaro, Hevila [1 ]
Falke, Sven [2 ,3 ]
Nzanzu Mudogo, Celestin [2 ]
Betzel, Christian [2 ,3 ]
机构
[1] Deutsch Elektronen Synchrotron DESY, Ctr Free Electron Laser Sci CFEL, D-22607 Hamburg, Germany
[2] Univ Hamburg, DESY, Lab Struct Biol Infect & Inflammat, Inst Biochem & Mol Biol, Build 22a,Notkestr 85, D-22607 Hamburg, Germany
[3] Hamburg Ctr Ultrafast Imaging, D-22607 Hamburg, Germany
关键词
liquid dense cluster; liquid-liquid phase separation; gelation; dynamic light scattering; depolarized dynamic light scattering; nucleation; carbohydrate-binding protein; response surface methodology; AQUEOUS-SOLUTIONS; CRYSTALLIZATION; PROTEINS; BEHAVIOR; GELATION; SIZE;
D O I
10.3390/cryst9120620
中图分类号
O7 [晶体学];
学科分类号
0702 ; 070205 ; 0703 ; 080501 ;
摘要
Protein phase separation and protein liquid cluster formation have been observed and analysed in protein crystallization experiments and, in recent years, have been reported more frequently, especially in studies related to membraneless organelles and protein cluster formation in cells. A detailed understanding about the phase separation process preceding liquid dense cluster formation will elucidate what has, so far, been poorly understood-despite intracellular crowding and phase separation being very common processes-and will also provide more insights into the early events of in vitro protein crystallization. In this context, the phase separation and crystallization kinetics of concanavalin A were analysed in detail, which applies simultaneous dynamic light scattering and depolarized dynamic light scattering to obtain insights into metastable intermediate states between the soluble phase and the crystalline form. A multi-step mechanism was identified for ConA phase separation, according to the resultant ACF decay, acquired after an increase in the concentration of the crowding agent until a metastable ConA gel intermediate between the soluble and final crystalline phases was observed. The obtained results also revealed that ConA is trapped in a macromolecular network due to short-range intermolecular protein interactions and is unable to transform back into a non-ergodic solution.
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页数:14
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共 53 条
[1]   Liquid-Liquid Phase Separation in Disease [J].
Alberti, Simon ;
Dormann, Dorothee .
ANNUAL REVIEW OF GENETICS, VOL 53, 2019, 53 :171-+
[2]   Considerations and Challenges in Studying Liquid-Liquid Phase Separation and Biomolecular Condensates [J].
Alberti, Simon ;
Gladfelter, Amy ;
Mittag, Tanja .
CELL, 2019, 176 (03) :419-434
[3]   Control of nacre biomineralization by Pif80 in pearl oyster [J].
Bahn, So Yeong ;
Jo, Byung Hoon ;
Choi, Yoo Seong ;
Cha, Hyung Joon .
SCIENCE ADVANCES, 2017, 3 (08)
[4]   Modeling and optimization I: Usability of response surface methodology [J].
Bas, Deniz ;
Boyaci, Ismail H. .
JOURNAL OF FOOD ENGINEERING, 2007, 78 (03) :836-845
[5]   Colloidal interactions [J].
Belloni, L .
JOURNAL OF PHYSICS-CONDENSED MATTER, 2000, 12 (46) :R549-R587
[6]   Response Surface Methodology Optimization of an Acidic Protease Produced by Penicillium bilaiae Isolate TDPEF30, a Newly Recovered Endophytic Fungus from Healthy Roots of Date Palm Trees (Phoenix dactylifera L.) [J].
Ben Mefteh, Fedia ;
Frikha, Fakher ;
Daoud, Amal ;
Bouket, Ali Chenari ;
Luptakova, Lenka ;
Alenezi, Faizah N. ;
Al-Anzi, Bader S. ;
Oszako, Tomasz ;
Gharsallah, Neji ;
Belbahri, Lassaad .
MICROORGANISMS, 2019, 7 (03)
[7]   Physical principles of intracellular organization via active and passive phase transitions [J].
Berry, Joel ;
Brangwynne, Clifford P. ;
Haataja, Mikko .
REPORTS ON PROGRESS IN PHYSICS, 2018, 80 (04)
[8]   Protein Phase Separation: A New Phase in Cell Biology [J].
Boeynaems, Steven ;
Alberti, Simon ;
Fawzi, Nicolas L. ;
Mittag, Tanja ;
Polymenidou, Magdalini ;
Rousseau, Frederic ;
Schymkowitz, Joost ;
Shorter, James ;
Wolozin, Benjamin ;
Van den Bosch, Ludo ;
Tompa, Peter ;
Fuxreiter, Monika .
TRENDS IN CELL BIOLOGY, 2018, 28 (06) :420-435
[9]   Theory of phase-ordering kinetics [J].
Bray, AJ .
ADVANCES IN PHYSICS, 2002, 51 (02) :481-587
[10]   Interplay between spinodal decomposition and glass formation in proteins exhibiting short-range attractions [J].
Cardinaux, Frederic ;
Gibaud, Thomas ;
Stradner, Anna ;
Schurtenberger, Peter .
PHYSICAL REVIEW LETTERS, 2007, 99 (11)