Heterogeneous resistance to quizartinib in acute myeloid leukemia revealed by single-cell analysis

被引:145
作者
Smith, Catherine C. [1 ,2 ]
Paguirigan, Amy [3 ]
Jeschke, Grace R. [4 ]
Lin, Kimberly C. [1 ]
Massi, Evan [1 ]
Tarver, Theodore [1 ]
Chin, Chen-Shan [5 ]
Asthana, Saurabh [2 ]
Olshen, Adam [2 ,6 ]
Travers, Kevin J. [5 ,8 ]
Wang, Susana [5 ]
Levis, Mark J. [7 ]
Perl, Alexander E. [4 ]
Radich, Jerald P. [3 ]
Shah, Neil P. [1 ,2 ]
机构
[1] Univ Calif San Francisco, Div Hematol Oncol, San Francisco, CA 94143 USA
[2] Univ Calif San Francisco, Helen Diller Family Comprehens Canc Ctr, San Francisco, CA 94143 USA
[3] Fred Hutchinson Canc Res Ctr, Seattle, WA 98104 USA
[4] Univ Penn, Div Hematol Oncol, Abramson Canc Ctr, Philadelphia, PA 19104 USA
[5] Pacific Biosci, Menlo Pk, CA USA
[6] Univ Calif San Francisco, Dept Epidemiol & Biostat, San Francisco, CA 94143 USA
[7] Johns Hopkins Univ, Dept Oncol, Sidney Kimmel Comprehens Canc Ctr, Baltimore, MD USA
[8] Roche Sequencing Solut, Santa Clara, CA USA
基金
美国国家卫生研究院;
关键词
THERAPEUTIC TARGET; CLONAL EVOLUTION; F691L MUTATION; FLT3; SORAFENIB; INHIBITION; MECHANISMS; EMERGENCE; CANCER; D835;
D O I
10.1182/blood-2016-04-711820
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Genomic studies have revealed significant branching heterogeneity in cancer. Studies of resistance to tyrosine kinase inhibitor therapy have not fully reflected this heterogeneity because resistance in individual patients has been ascribed to largely mutually exclusive on-target or off-target mechanisms in which tumors either retain dependency on the target oncogene or subvert it through a parallel pathway. Using targeted sequencing from single cells and colonies from patient samples, we demonstrate tremendous clonal diversity in the majority of acute myeloid leukemia (AML) patients with activating FLT3 internal tandem duplication mutations at the time of acquired resistance to the FLT3 inhibitor quizartinib. These findings establish that clinical resistance to quizartinib is highly complex and reflects the underlying clonal heterogeneity of AML.
引用
收藏
页码:48 / 58
页数:11
相关论文
共 40 条
[1]   The secondary FLT3-ITD F691L mutation induces resistance to AC220 in FLT3-ITD+ AML but retains in vitro sensitivity to PKC412 and Sunitinib [J].
Albers, C. ;
Leischner, H. ;
Verbeek, M. ;
Yu, C. ;
Illert, A. L. ;
Peschel, C. ;
von Bubnoff, N. ;
Duyster, J. .
LEUKEMIA, 2013, 27 (06) :1416-1418
[2]   Emergence of Polyclonal FLT3 Tyrosine Kinase Domain Mutations during Sequential Therapy with Sorafenib and Sunitinib in FLT3-ITD-Positive Acute Myeloid Leukemia [J].
Baker, Sharyn D. ;
Zimmerman, Eric I. ;
Wang, Yong-Dong ;
Orwick, Shelley ;
Zatechka, Douglas S. ;
Buaboonnam, Jassada ;
Neale, Geoffrey A. ;
Olsen, Scott R. ;
Enemark, Eric J. ;
Shurtleff, Sheila ;
Rubnitz, Jeffrey E. ;
Mullighan, Charles G. ;
Inaba, Hiroto .
CLINICAL CANCER RESEARCH, 2013, 19 (20) :5758-5768
[3]   Bromodomain inhibitor OTX015 in patients with acute leukaemia: a dose-escalation, phase 1 study [J].
Berthon, Celine ;
Raffoux, Emmanuel ;
Thomas, Xavier ;
Vey, Norbert ;
Gomez-Roca, Carlos ;
Yee, Karen ;
Taussig, David Christopher ;
Rezai, Keyvan ;
Roumier, Christophe ;
Herait, Patrice ;
Kahatt, Carmen ;
Quesnel, Bruno ;
Michallet, Mauricette ;
Recher, Christian ;
Lokiec, Francois ;
Preudhomme, Claude ;
Dombret, Herve .
LANCET HAEMATOLOGY, 2016, 3 (04) :E186-E195
[4]   Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples [J].
Cibulskis, Kristian ;
Lawrence, Michael S. ;
Carter, Scott L. ;
Sivachenko, Andrey ;
Jaffe, David ;
Sougnez, Carrie ;
Gabriel, Stacey ;
Meyerson, Matthew ;
Lander, Eric S. ;
Getz, Gad .
NATURE BIOTECHNOLOGY, 2013, 31 (03) :213-219
[5]   Preleukemic mutations in human acute myeloid leukemia affect epigenetic regulators and persist in remission [J].
Corces-Zimmerman, M. Ryan ;
Hong, Wan-Jen ;
Weissman, Irving L. ;
Medeiros, Bruno C. ;
Majeti, Ravindra .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (07) :2548-2553
[6]   Results Of a Phase 2 Randomized, Open-Label, Study Of Lower Doses Of Quizartinib (AC220; ASP2689) In Subjects With FLT3-ITD Positive Relapsed Or Refractory Acute Myeloid Leukemia (AML) [J].
Cortes, Jorge E. ;
Tallman, Martin S. ;
Schiller, Gary ;
Trone, Denise ;
Gammon, Guy ;
Goldberg, Stuart ;
Perl, Alexander E. ;
Marie, Jean Pierre ;
Martinelli, Giovanni ;
Levis, Mark .
BLOOD, 2013, 122 (21)
[7]   Inhibition of BET recruitment to chromatin as an effective treatment for MLL-fusion leukaemia [J].
Dawson, Mark A. ;
Prinjha, Rab K. ;
Dittmann, Antje ;
Giotopoulos, George ;
Bantscheff, Marcus ;
Chan, Wai-In ;
Robson, Samuel C. ;
Chung, Chun-wa ;
Hopf, Carsten ;
Savitski, Mikhail M. ;
Huthmacher, Carola ;
Gudgin, Emma ;
Lugo, Dave ;
Beinke, Soren ;
Chapman, Trevor D. ;
Roberts, Emma J. ;
Soden, Peter E. ;
Auger, Kurt R. ;
Mirguet, Olivier ;
Doehner, Konstanze ;
Delwel, Ruud ;
Burnett, Alan K. ;
Jeffrey, Phillip ;
Drewes, Gerard ;
Lee, Kevin ;
Huntly, Brian J. P. ;
Kouzarides, Tony .
NATURE, 2011, 478 (7370) :529-533
[8]   Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing [J].
Ding, Li ;
Ley, Timothy J. ;
Larson, David E. ;
Miller, Christopher A. ;
Koboldt, Daniel C. ;
Welch, John S. ;
Ritchey, Julie K. ;
Young, Margaret A. ;
Lamprecht, Tamara ;
McLellan, Michael D. ;
McMichael, Joshua F. ;
Wallis, John W. ;
Lu, Charles ;
Shen, Dong ;
Harris, Christopher C. ;
Dooling, David J. ;
Fulton, Robert S. ;
Fulton, Lucinda L. ;
Chen, Ken ;
Schmidt, Heather ;
Kalicki-Veizer, Joelle ;
Magrini, Vincent J. ;
Cook, Lisa ;
McGrath, Sean D. ;
Vickery, Tammi L. ;
Wendl, Michael C. ;
Heath, Sharon ;
Watson, Mark A. ;
Link, Daniel C. ;
Tomasson, Michael H. ;
Shannon, William D. ;
Payton, Jacqueline E. ;
Kulkarni, Shashikant ;
Westervelt, Peter ;
Walter, Matthew J. ;
Graubert, Timothy A. ;
Mardis, Elaine R. ;
Wilson, Richard K. ;
DiPersio, John F. .
NATURE, 2012, 481 (7382) :506-510
[9]   MEK1 mutations confer resistance to MEK and B-RAF inhibition [J].
Emery, Caroline M. ;
Vijayendran, Krishna G. ;
Zipser, Marie C. ;
Sawyer, Allison M. ;
Niu, Lili ;
Kim, Jessica J. ;
Hatton, Charles ;
Chopra, Rajiv ;
Oberholzer, Patrick A. ;
Karpova, Maria B. ;
MacConaill, Laura E. ;
Zhang, Jianming ;
Gray, Nathanael S. ;
Sellers, William R. ;
Dummer, Reinhard ;
Garraway, Levi A. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (48) :20411-20416
[10]   MET amplification leads to gefitinib resistance in lung cancer by activating ERBB3 signaling [J].
Engelman, Jeffrey A. ;
Zejnullahu, Kreshnik ;
Mitsudomi, Tetsuya ;
Song, Youngchul ;
Hyland, Courtney ;
Park, Joon Oh ;
Lindeman, Neal ;
Gale, Christopher-Michael ;
Zhao, Xiaojun ;
Christensen, James ;
Kosaka, Takayuki ;
Holmes, Alison J. ;
Rogers, Andrew M. ;
Cappuzzo, Federico ;
Mok, Tony ;
Lee, Charles ;
Johnson, Bruce E. ;
Cantley, Lewis C. ;
Janne, Pasi A. .
SCIENCE, 2007, 316 (5827) :1039-1043