PHYSICOCHEMICAL ANALYSES OF A BIOACTIVE 4-AMINOANTIPYRINE ANALOGUE - SYNTHESIS, CRYSTAL STRUCTURE, SOLID STATE INTERACTIONS, ANTIBACTERIAL, CONFORMATIONAL AND DOCKING STUDIES

被引:13
作者
Alam, Mohammad Sayed [1 ,2 ]
Lee, Dong-Ung [1 ]
机构
[1] Dongguk Univ, Div Biosci, Gyeongju 780714, South Korea
[2] Jagannath Univ, Dept Chem, Dhaka 1100, Bangladesh
来源
EXCLI JOURNAL | 2016年 / 15卷
关键词
4-Aminoantipyrine; crystal structure; molecular interactions; antibacterial; docking; SCHIFF-BASE ANALOGS; ANTIOXIDANT;
D O I
10.17179/excli2016-477
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
A novel Schiff base derivative of 4-aminoantipyrine, that is, (E)-4-(2-methoxybenzylideneamino)-1,5-dimethyl-2-phenyl-1H-pyrazol-3(2H)-one (MBA-dMPP), was synthesized and characterized by FT-IR, H-1-NMR, and EI-MS. Single-crystal X-ray diffraction data revealed MBA-dMPP adopts a trans configuration around its central C=N double bond, and forms orthorhombic crystals. XRD revealed that MBA-dMPP possess two different planes, in which the pyrazolone and benzylidene groups attached to C9 of the pyrazolone ring are almost coplanar and the phenyl ring connected to the N1 atom of the pyrazolone moiety lies in another plane. The intermolecular, host-guest C-H center dot center dot center dot O, C-H center dot center dot center dot N, and C-H center dot center dot center dot C van der Waals interactions were found to form a 3D network and confer stability to the MBA-dMPP crystal structure. The quantitative and qualitative solid state behaviors of MBA-dMPP were subjected to 3D Hirshfeld surface analysis and 2D fingerprint plotting. Reciprocal H center dot center dot center dot H contacts contributed most (52.9 %) to the Hirshfeld surface, followed by C center dot center dot center dot H/H center dot center dot center dot C contacts (30.2 %), whereas, O center dot center dot center dot H/H center dot center dot center dot O and N center dot center dot center dot H/H center dot center dot center dot N interactions contributed 15.5 % to the Hirshfeld surface. Electrostatic potentials were mapped over the Hirshfeld surface to analyze electrostatic complementarities within the MBA-dMPP crystal. In addition, geometrical descriptors were also analyzed to the extent of surface interactions. MBA-dMPP was also investigated for in vitro antibacterial activity against Gram-positive and Gram-negative bacterial strains, and showed highest activity against Bacillus cereus (MIC = 12.5 mu g mL(-1)) and Salmonella tythimurium (MIC = 50 mu g mL(-1)). In silico screening was conducted by docking MBA-dMPP on the active site of S12 bacterial protein (an important therapeutic target of antibacterial agents) and its binding properties were compared with those of ciprofloxacin. Moreover, a field points map of MBA-dMPP ligand was studied to determine electrostatic and van der Waals forces, hydrophobic potentials, and positions involved in ligand-receptor interactions. Finally, the torsion energies of crystal structure and optimized and bioactive conformers of MBA-dMPP were compared to predict its bioactive conformation.
引用
收藏
页码:614 / 629
页数:16
相关论文
共 30 条
[1]   Designing and synthesis of novel antimicrobial heterocyclic analogs of fatty acids [J].
Ahmad, Aiman ;
Ahmad, Anis ;
Varshney, Himani ;
Rauf, Abdul ;
Rehan, Mohd ;
Subbarao, Naidu ;
Khan, Asad U. .
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2013, 70 :887-900
[2]   Antibacterial and Cytotoxic Activities of Schiff Base Analogues of 4-Aminoantipyrine [J].
Alam, Mohammad Sayed ;
Lee, Dong-Ung ;
Bari, Md Latiful .
JOURNAL OF THE KOREAN SOCIETY FOR APPLIED BIOLOGICAL CHEMISTRY, 2014, 57 (05) :613-619
[3]   Synthesis of novel Schiff base analogues of 4-amino-1,5-dimethyl-2-phenylpyrazol-3-one and their evaluation for antioxidant and anti-inflammatory activity [J].
Alam, Mohammad Sayed ;
Choi, Jung-Hyun ;
Lee, Dong-Ung .
BIOORGANIC & MEDICINAL CHEMISTRY, 2012, 20 (13) :4103-4108
[4]   Synthesis, Molecular Structure and Antioxidant Activity of (E)-4-[Benzylideneamino]-1,5-dimethyl-2-phenyl-1H-pyrazol-3(2H)-one, a Schiff Base Ligand of 4-Aminoantipyrine [J].
Alam, Mohammad Sayed ;
Lee, Dong-Ung .
JOURNAL OF CHEMICAL CRYSTALLOGRAPHY, 2012, 42 (02) :93-102
[5]   Synthesis, Antibacterial Activity and Quantum-Chemical Studies of Novel 2-Arylidenehydrazinyl-4-arylthiazole Analogues [J].
Alam, Mohammad Sayed ;
Liu, Lijun ;
Lee, Yong-Eok ;
Lee, Dong-Ung .
CHEMICAL & PHARMACEUTICAL BULLETIN, 2011, 59 (05) :568-573
[6]   Bioactive conformational generation of small molecules: A comparative analysis between force-field and multiple empirical criteria based methods [J].
Bai, Fang ;
Liu, Xiaofeng ;
Li, Jiabo ;
Zhang, Haoyun ;
Jiang, Hualiang ;
Wang, Xicheng ;
Li, Honglin .
BMC BIOINFORMATICS, 2010, 11
[7]   Chemical synthesis, molecular modelling, and evaluation of anticancer activity of some pyrazol-3-one Schiff base derivatives [J].
Bensaber, Salah M. ;
Allafe, H. A. ;
Ermeli, Nouri B. ;
Mohamed, Salah B. ;
Zetrini, Abdulmottaleb A. ;
Alsabri, Sami G. ;
Erhuma, Mabrouk ;
Hermann, Anton ;
Jaeda, Mousa I. ;
Gbaj, Abdul M. .
MEDICINAL CHEMISTRY RESEARCH, 2014, 23 (12) :5120-5134
[8]  
Bruker AXS Inc, 2000, SAINT PLUS VERS 5 62
[9]  
Bruker AXS Inc, 2000, SMART VERS 5 625 WIN
[10]   Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics [J].
Carter, AP ;
Clemons, WM ;
Brodersen, DE ;
Morgan-Warren, RJ ;
Wimberly, BT ;
Ramakrishnan, V .
NATURE, 2000, 407 (6802) :340-348