Delineating the Ligand-Receptor Interactions That Lead to Biased Signaling at the μ-Opioid Receptor

被引:14
作者
Kelly, Brendan [1 ,2 ,3 ,4 ]
Hollingsworth, Scott A. [1 ,2 ,3 ,4 ,5 ]
Blakemore, David C. [6 ]
Owen, Robert M. [7 ]
Storer, R. Ian [7 ,8 ]
Swain, Nigel A. [7 ,9 ]
Aydin, Deniz [1 ,2 ,3 ,4 ]
Torella, Rubben [10 ]
Warmus, Joseph S. [6 ]
Dror, Ron O. [1 ,2 ,3 ,4 ]
机构
[1] Stanford Univ, Dept Comp Sci, Stanford, CA 94305 USA
[2] Stanford Univ, Dept Mol & Cellular Physiol, Stanford, CA 94305 USA
[3] Stanford Univ, Dept Struct Biol, Stanford, CA 94305 USA
[4] Stanford Univ, Inst Computat & Math Engn, Stanford, CA 94305 USA
[5] Merck & Co Inc, Computat & Struct Chem, San Francisco, CA 94080 USA
[6] Pfizer Med Design, Groton, CT 06340 USA
[7] Pfizer Med Design, Cambridge CB21 6GS, England
[8] AstraZeneca, R&D, Discovery Sci, Cambridge SK10 4TG, England
[9] Sosei Heptares, Steinmetz Bldg,Granta Pk, Cambridge CB21 6DG, England
[10] Pfizer Med Design, Cambridge, MA 02139 USA
基金
美国国家卫生研究院;
关键词
GENERAL FORCE-FIELD; MOLECULAR-DYNAMICS SIMULATIONS; G-PROTEIN; BETA-ARRESTIN; STRUCTURAL INSIGHTS; CRYSTAL-STRUCTURE; MICE LACKING; MORPHINE; TRV130; DISCOVERY;
D O I
10.1021/acs.jcim.1c00585
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Biased agonists, which selectively stimulate certain signaling pathways controlled by a G protein-coupled receptor (GPCR), hold great promise as drugs that maximize efficacy while minimizing dangerous side effects. Biased agonists of the mu-opioid receptor (mu OR) are of particular interest as a means to achieve analgesia through G protein signaling without dose-limiting side effects such as respiratory depression and constipation. Rational structure-based design of biased agonists remains highly challenging, however, because the ligand-mediated interactions that are key to activation of each signaling pathway remain unclear. We identify several compounds for which the R- and S-enantiomers have distinct bias profiles at the FOR. These compounds serve as excellent comparative tools to study bias because the identical physicochemical properties of enantiomer pairs ensure that differences in bias profiles are due to differences in interactions with the mu OR binding pocket. Atomic-level simulations of compounds at mu OR indicate that R- and S-enantiomers adopt different poses that form distinct interactions with the binding pocket. A handful of specific interactions with highly conserved binding pocket residues appear to be responsible for substantial differences in arrestin recruitment between enantiomers. Our results offer guidance for rational design of biased agonists at mu OR and possibly at related GPCRs.
引用
收藏
页码:3696 / 3707
页数:12
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