Three problems with the conventional delta-model for biomass sampling data, and a computationally efficient alternative

被引:67
作者
Thorson, James T. [1 ]
机构
[1] NOAA, Fisheries Resource Assessment & Monitoring Div, Northwest Fisheries Sci Ctr, Natl Marine Fisheries Serv, Seattle, WA 98112 USA
关键词
TWEEDIE DISTRIBUTION; RELATIVE ABUNDANCE; GAMMA; CATCH;
D O I
10.1139/cjfas-2017-0266
中图分类号
S9 [水产、渔业];
学科分类号
0908 ;
摘要
Ecologists often analyse biomass sampling data that result in many zeros, where remaining samples can take any positive real number. Samples are often analysed using a "delta-model" that combines two separate generalized linear models, GLMs (for encounter probability and positive catch rates), or less often using a compound Poisson-gamma (CPG) distribution that is computationally expensive. I discuss three theoretical problems with the conventional delta-model: difficulty interpreting covariates for encounter probability, the assumed independence of the two GLMs, and the biologically implausible form when eliminating covariates for either GLM. I then derive an alternative "Poisson-link model" that solves these problems. To illustrate, I use biomass samples for 113 fish populations to show that the Poisson-link model improves fit (and decreases residual spatial variation) for >80% of populations relative to the conventional delta-model. A simulation experiment illustrates that CPG and Poisson-link models estimate covariate effects that are similar and biologically interpretable. I therefore recommend the Poisson-link model as a useful alternative to the conventional delta-model with similar properties to the CPG distribution.
引用
收藏
页码:1369 / 1382
页数:14
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