The food industry is concerned about the presence of hidden allergens or undesired protein residues in final products and has to take measures to comply with current food allergen-labelling regulations. It is known that thermal processing decreases protein solubility and hinders the accuracy of their quantitation. The objective of this study was to optimise the extraction step before quantitation. Almonds were roasted at several temperatures (230, 260 and 400 degrees C) for 10 min and ground to meals, defatted and extracted with water, PBS and PBST for 30 min at 25 degrees C, 40 degrees C, 60 degrees C and 70 degrees C, respectively. The extracts were then sonicated in a temperature-controlled water bath and aliquots were taken after 0, 1, 3, 5 and 10 min of sonication. Ultrasonic treatment improved protein extraction from almonds, especially those roasted at 260 and 400 degrees C. The temperature of the extraction buffer proved to be important, with higher yields at 60 and 70 degrees C. Use of a higher temperature, with sonication for 5-10 min, increased the amount of protein extracted with PBST (from 141% to 174% for almonds roasted at 260 degrees C and 287% to 333% for almonds roasted at 400 degrees C). The BCA assay was used to measure the amount of soluble almond protein. Improved extraction of almond proteins from processed samples is presented. (C) 2011 Elsevier Ltd. All rights reserved.