Five novel globin gene mutations identified in five Chinese families by next-generation sequencing

被引:7
作者
Zhang, Jie [1 ,2 ,3 ,4 ]
Xie, Meijuan [1 ]
Peng, Zhiyu [5 ]
Zhou, Xiaoyan [1 ,3 ]
Zhao, Tingting [1 ,3 ]
Jin, Chanchan [1 ,3 ]
Yan, Yuanlong [1 ]
Zeng, Xiaohong [1 ]
Li, Dongmei [1 ]
Zhang, Yangjia [1 ]
Su, Jie [1 ]
Feng, Na [1 ]
He, Jing [1 ,3 ]
Yao, Xiangmei [4 ]
Lv, Tao [1 ,3 ]
Zhu, Baosheng [1 ,2 ,3 ]
机构
[1] First Peoples Hosp Yunnan Prov, Dept Med Genet, Yunnan Prov Key Lab Birth Defects & Genet Dis, Kunming, Yunnan, Peoples R China
[2] First Peoples Hosp Yunnan Prov, Yunnan Prov Clin Res Ctr Birth Defects & Rare Dis, Dept Obstet & Gynecol, Kunming, Yunnan, Peoples R China
[3] Kunming Univ Sci & Technol, Affiliated Hosp, Kunming, Yunnan, Peoples R China
[4] First Peoples Hosp Yunnan Prov, Dept Hematol, Kunming, Yunnan, Peoples R China
[5] BGI Shenzhen, BGI Genom, Shenzhen, Guangdong, Peoples R China
基金
中国国家自然科学基金;
关键词
bioinformatics analysis; next-generation sequencing; pathogenicity; thalassemia; HB H DISEASE; ALPHA-THALASSEMIA; HEMOGLOBIN; VARIANT; POPULATION;
D O I
10.1002/mgg3.1835
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background: Thalassemia is one of the most common inherited diseases worldwide. This report presents three novel cases of alpha-thalassemia and two novel cases of beta-thalassemia caused by five different mutations in the globin gene. Methods: Next-generation sequencing (NGS) was used to identify novel alpha- and beta-thalassemia in five individuals, which was confirmed by Sanger sequencing of the globin gene. Hematological parameters were determined by an automated cell counter, and hemoglobin electrophoresis was carried out by a capillary electrophoresis system, respectively. The isoelectric point (pI), molecular weight, and conservation for the mutations were described by the Internet software programs. The pathogenicity for globin mutations was analyzed by bioinformatics analysis and relative quantitative analysis. Results: NGS revealed five novel cases of alpha- and beta-thalassemia: HBA2:c.245C>T, HBA2:c.95+11_95+34delCTCCCCTGCTCCGACCCGGGCTCC, HBA2:c.54delC, HBB:c.373C>A, and HBB:c.40G>A. The clinical implications of these mutations were described. Computational predictions were made for pI, amino acid conservation, and pathogenicity of the missense mutation. Relative quantitative data of the alpha-globin mRNA were analyzed. Conclusion: Five novel globin mutations were identified in the populations of China, and those mutations were analyzed to provide a mechanistic view for their pathogenicity. These analyzed results improve genetic diagnostics for thalassemia, which can improve screening programs for thalassemia and prenatal diagnosis for Chinese population.
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页数:8
相关论文
共 26 条
[1]   STRUCTURAL STUDIES OF A NEW HEMOGLOBIN - HBJ LENS, BETA-13(A10) ALA-]ASP [J].
DJOUMESSI, S ;
ROUSSEAUX, J ;
DAUTREVAUX, M .
FEBS LETTERS, 1981, 136 (01) :145-147
[2]  
Fathi Afshin, 2019, Mater Sociomed, V31, P294, DOI 10.5455/msm.2019.31.294-297
[3]   Undiagnosed Hemoglobinopathies: A potential threat to the premarital screening program [J].
Hamali, Hassan A. ;
Saboor, Muhammad .
PAKISTAN JOURNAL OF MEDICAL SCIENCES, 2019, 35 (06) :1611-1615
[4]   Molecular spectrum of α-thalassemia in the Iranian population of Hormozgan:: Three novel point mutation defects [J].
Harteveld, CL ;
Yavarian, M ;
Zorai, A ;
Quakkelaar, ED ;
van Delft, P ;
Giordano, PC .
AMERICAN JOURNAL OF HEMATOLOGY, 2003, 74 (02) :99-103
[5]   Next-generation sequencing improves thalassemia carrier screening among premarital adults in a high prevalence population: the Dai nationality, China [J].
He, Jing ;
Song, Wenhui ;
Yang, Jinlong ;
Lu, Sen ;
Yuan, Yuan ;
Guo, Junfu ;
Zhang, Jie ;
Ye, Kai ;
Yang, Fan ;
Long, Fangfang ;
Peng, Zhiyu ;
Yu, Haijing ;
Cheng, Le ;
Zhu, Baosheng .
GENETICS IN MEDICINE, 2017, 19 (09) :1022-1031
[6]   First Report of a Case with Nondeletional Hb H Disease Caused by IVS-I-116 (A>G) of the α2-Globin Gene [J].
He, Xiao-Hong ;
Zhang, Rui ;
Mai, Guang-Xing ;
Ren, Li-Rong ;
Li, Dong-Zhi .
HEMOGLOBIN, 2018, 42 (5-6) :344-346
[7]   Ten Years of Routine α- and β-Globin Gene Sequencing in UK Hemoglobinopathy Referrals Reveals 60 Novel Mutations [J].
Henderson, Shirley J. ;
Timbs, Adele T. ;
McCarthy, Janice ;
Gallienne, Alice E. ;
Proven, Melanie ;
Rugless, Michelle J. ;
Lopez, Herminio ;
Eglinton, Jennifer ;
Dziedzic, Dariusz ;
Beardsall, Matthew ;
Khalil, Mohamed S. M. ;
Old, John M. .
HEMOGLOBIN, 2016, 40 (02) :75-84
[8]   Hb Khartoum [β124(H2)Pro→Arg] in a Vietnamese female [J].
Hendy, JG ;
Garofalo, K ;
Bowden, DK .
HEMOGLOBIN, 1999, 23 (03) :291-293
[9]  
HONIG GR, 1980, BLOOD, V55, P131
[10]   Two α1-Globin Gene Point Mutations Causing Severe Hb H Disease [J].
Jiang, Hua ;
Huang, Lv-Yin ;
Zhen, Li ;
Jiang, Fan ;
Li, Dong-Zhi .
HEMOGLOBIN, 2017, 41 (4-6) :293-296