A high affinity phage-displayed peptide as a recognition probe for the detection of Salmonella Typhimurium
被引:25
作者:
Agrawal, Shailaja
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Agharkar Res Inst, Nanobiosci Grp, GG Agarkar Rd, Pune 411004, Maharashtra, IndiaAgharkar Res Inst, Nanobiosci Grp, GG Agarkar Rd, Pune 411004, Maharashtra, India
Agrawal, Shailaja
[1
]
Kulabhusan, Prabir Kumar
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Agharkar Res Inst, Nanobiosci Grp, GG Agarkar Rd, Pune 411004, Maharashtra, IndiaAgharkar Res Inst, Nanobiosci Grp, GG Agarkar Rd, Pune 411004, Maharashtra, India
Kulabhusan, Prabir Kumar
[1
]
Joshi, Manali
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机构:
Savitribai Phule Pune Univ, Bioinformat Ctr, Pune 411007, Maharashtra, IndiaAgharkar Res Inst, Nanobiosci Grp, GG Agarkar Rd, Pune 411004, Maharashtra, India
Joshi, Manali
[2
]
Bodas, Dhananjay
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Agharkar Res Inst, Nanobiosci Grp, GG Agarkar Rd, Pune 411004, Maharashtra, IndiaAgharkar Res Inst, Nanobiosci Grp, GG Agarkar Rd, Pune 411004, Maharashtra, India
Bodas, Dhananjay
[1
]
Paknikar, Kishore M.
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Agharkar Res Inst, Nanobiosci Grp, GG Agarkar Rd, Pune 411004, Maharashtra, IndiaAgharkar Res Inst, Nanobiosci Grp, GG Agarkar Rd, Pune 411004, Maharashtra, India
Paknikar, Kishore M.
[1
]
机构:
[1] Agharkar Res Inst, Nanobiosci Grp, GG Agarkar Rd, Pune 411004, Maharashtra, India
[2] Savitribai Phule Pune Univ, Bioinformat Ctr, Pune 411007, Maharashtra, India
Salmonellosis is one of the most common and widely distributed foodborne diseases. A sensitive and robust detection method of Salmonella Typhimurium (S. Typhimurium) in food can critically prevent a disease outbreak. In this work, the use of phage displayed peptides was explored for the detection of S. Typhimurium. A phage-displayed random dodecapeptide library was subjected to biopanning against lipopolysaccharide (LPS) of S. Typhimurium. The peptide NFMESLPRLGMH (pep49) derived from biopanning displayed a high affinity (25.8 nM) for the LPS of S. Typhimurium and low cross-reactivity with other strains of Salmonella and related Gram-negative bacteria. Molecular insights into the interaction of pep49 with the LPS of S. Typhimurium was gleaned using atomistic molecular dynamics simulations and docking. It was deduced that the specificity of pep49 with S. Typhimurium LPS originated from the interactions of pep49 with abequose that is found only in the O-antigen of S. Typhimurium. Further, pep49 was able to detect S. Typhimurium at a LOD of 10(3) CFU/mL using ELISA, and may be a potential cost efficient alternative to antibodies. (C) 2016 Elsevier B.V. All rights reserved.
机构:
Univ Michigan, Dept Chem, Ann Arbor, MI 48109 USA
Univ Michigan, Dept Biophys, Ann Arbor, MI 48109 USANHLBI, Lab Computat Biol, NIH, Bethesda, MD 20892 USA
机构:
N Carolina State Univ, Dept Food Bioproc & Nutr Sci, Raleigh, NC 27695 USA
N Carolina State Univ, Coll Vet Med, Raleigh, NC 27606 USAN Carolina State Univ, Dept Food Bioproc & Nutr Sci, Raleigh, NC 27695 USA
Dwivedi, Hari P.
;
Jaykus, Lee-Ann
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N Carolina State Univ, Dept Food Bioproc & Nutr Sci, Raleigh, NC 27695 USA
N Carolina State Univ, Coll Vet Med, Raleigh, NC 27606 USAN Carolina State Univ, Dept Food Bioproc & Nutr Sci, Raleigh, NC 27695 USA
机构:
Rockefeller Univ, Labs Mol Biophys, Pels Family Ctr Biochem & Struct Biol, New York, NY 10021 USARockefeller Univ, Labs Mol Biophys, Pels Family Ctr Biochem & Struct Biol, New York, NY 10021 USA
Fiser, A
;
Do, RKG
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Rockefeller Univ, Labs Mol Biophys, Pels Family Ctr Biochem & Struct Biol, New York, NY 10021 USARockefeller Univ, Labs Mol Biophys, Pels Family Ctr Biochem & Struct Biol, New York, NY 10021 USA
Do, RKG
;
Sali, A
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Rockefeller Univ, Labs Mol Biophys, Pels Family Ctr Biochem & Struct Biol, New York, NY 10021 USARockefeller Univ, Labs Mol Biophys, Pels Family Ctr Biochem & Struct Biol, New York, NY 10021 USA
机构:
Univ Michigan, Dept Chem, Ann Arbor, MI 48109 USA
Univ Michigan, Dept Biophys, Ann Arbor, MI 48109 USANHLBI, Lab Computat Biol, NIH, Bethesda, MD 20892 USA
机构:
N Carolina State Univ, Dept Food Bioproc & Nutr Sci, Raleigh, NC 27695 USA
N Carolina State Univ, Coll Vet Med, Raleigh, NC 27606 USAN Carolina State Univ, Dept Food Bioproc & Nutr Sci, Raleigh, NC 27695 USA
Dwivedi, Hari P.
;
Jaykus, Lee-Ann
论文数: 0引用数: 0
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机构:
N Carolina State Univ, Dept Food Bioproc & Nutr Sci, Raleigh, NC 27695 USA
N Carolina State Univ, Coll Vet Med, Raleigh, NC 27606 USAN Carolina State Univ, Dept Food Bioproc & Nutr Sci, Raleigh, NC 27695 USA
机构:
Rockefeller Univ, Labs Mol Biophys, Pels Family Ctr Biochem & Struct Biol, New York, NY 10021 USARockefeller Univ, Labs Mol Biophys, Pels Family Ctr Biochem & Struct Biol, New York, NY 10021 USA
Fiser, A
;
Do, RKG
论文数: 0引用数: 0
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机构:
Rockefeller Univ, Labs Mol Biophys, Pels Family Ctr Biochem & Struct Biol, New York, NY 10021 USARockefeller Univ, Labs Mol Biophys, Pels Family Ctr Biochem & Struct Biol, New York, NY 10021 USA
Do, RKG
;
Sali, A
论文数: 0引用数: 0
h-index: 0
机构:
Rockefeller Univ, Labs Mol Biophys, Pels Family Ctr Biochem & Struct Biol, New York, NY 10021 USARockefeller Univ, Labs Mol Biophys, Pels Family Ctr Biochem & Struct Biol, New York, NY 10021 USA