Paenibacillus allorhizoplanae sp. nov. from the rhizoplane of a Zea mays root

被引:10
作者
Kaempfer, Peter [1 ]
Lipski, Andre [2 ]
Lamothe, Lucie [3 ,4 ]
Clermont, Dominique [5 ]
Criscuolo, Alexis [4 ]
McInroy, John A. [6 ]
Glaeser, Stefanie P. [1 ]
机构
[1] Justus Liebig Univ Giessen, Inst Angew Mikrobiol, Heinrich Buff Ring 26-32, D-35392 Giessen, Germany
[2] Rheinische Friedrich Wilhelms Univ Bonn, Inst Ernahrungs & Lebensmittelwissensch Lebensmit, Bonn, Germany
[3] Inst Francais Bioinformat, IFB Core, CNRS, UMS 3601, Evry, France
[4] Univ Paris, Inst Pasteur, Bioinformat & Biostat Hub, F-75015 Paris, France
[5] Univ Paris, Inst Pasteur, CIP Collect Inst Pasteur, F-75015 Paris, France
[6] Auburn Univ, Dept Entomol & Plant Pathol, Auburn, AL 36849 USA
关键词
Paenibacillus allorhizoplanae; Taxonomy; Zea mays; Endophyte; Plant associated; Genome sequence; ENDOPHYTIC BACTERIUM; RHIZOSPHERE; IDENTIFICATION; SOIL; PHYLLOSPHERE; SEQUENCE; GENE;
D O I
10.1007/s00203-022-03225-w
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-positive staining, aerobic, endospore-forming bacterial strain, isolated from the rhizosphere of Zea mays was studied for its detailed taxonomic allocation. Based on the 16S rRNA gene sequence similarity comparisons, strain JJ-42( T) was shown to be a member of the genus Paenibacillus, most closely related to the type strain of Paenibacillus pectinilyticus (98.8%). The 16S rRNA gene sequence similarity to all other Paenibacillus species was below 98.5%. The pairwise average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values of the JJ-42( T) genome assembly against publicly available Paenibacillus type strain genomes were below 92% and 47%, respectively. The quinone system of strain JJ-42( T) consisted exclusively of menaquinone MK-7. The polar lipid profile consisted of the major components diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, three aminophospholipids (APL), and one unidentified lipid. The major fatty acids were iso- and anteiso-branched with the major compound anteiso C-15:0. Physiological and biochemical characteristics allowed a further phenotypic differentiation of strain JJ-42( T) from the most closely related species. Thus, JJ-42( T) represents a novel species of the genus Paenibacillus, for which the name Paenibacillus allorhizoplanae sp. nov. is proposed, with JJ-42( T) (= LMG 32089( T) = CCM 9085( T) = DSM 111786( T) = CIP 111891( T)) as the type strain.
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页数:9
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