Genetic variation analyses by Pyrosequencing

被引:94
作者
Langaee, T [1 ]
Ronaghi, M
机构
[1] Univ Florida, Ctr Pharmacogenom, Dept Pharm Practice, Gainesville, FL USA
[2] Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
[3] Univ Tehran, Inst Biochem & Biophys, Tehran, Iran
关键词
SNP; pyrosequencing; re-sequencing; bioluminescence; haplotyping; mutation detection luciferase;
D O I
10.1016/j.mrfmmm.2004.07.023
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Pyrosequencing is a real-time bioluminometric technique for determination of nucleic acid sequence. Here, we review recent advances and discuss new applications of this technique. Cost reduction efforts and future potentials of this technique for large-scale genotyping applications will also be discussed. (c) 2005 Elsevier B.V. All rights reserved.
引用
收藏
页码:96 / 102
页数:7
相关论文
共 41 条
  • [1] Single-nucleotide polymorphism analysis by pyrosequencing
    Ahmadian, A
    Gharizadeh, B
    Gustafsson, AC
    Sterky, F
    Nyrén, P
    Uhlén, M
    Lundeberg, J
    [J]. ANALYTICAL BIOCHEMISTRY, 2000, 280 (01) : 103 - 110
  • [2] Analysis of the p53 tumor suppressor gene by pyrosequencing
    Ahmadian, A
    Lundeberg, J
    Nyrén, P
    Uhlén, M
    Ronaghi, M
    [J]. BIOTECHNIQUES, 2000, 28 (01) : 140 - +
  • [3] Comparison of cytochrome P4502C9 genotyping methods and implications for the clinical laboratory
    Aquilante, CL
    Lobmeyer, MT
    Langaee, TY
    Johnson, JA
    [J]. PHARMACOTHERAPY, 2004, 24 (06): : 720 - 726
  • [4] ARAKAWA H, 2004, 2 INT FOR POST GEN T
  • [5] Comparison of GenFlex Tag Array and Pyrosequencing in SNP genotyping
    Chen, DC
    Saarela, J
    Nuotio, I
    Jokiaho, A
    Peltonen, L
    Palotie, A
    [J]. JOURNAL OF MOLECULAR DIAGNOSTICS, 2003, 5 (04) : 243 - 249
  • [6] Sensitive and quantitative universal Pyrosequencing™ methylation analysis of CpG sites
    Colella, S
    Shen, L
    Baggerly, KA
    Issa, JPJ
    Krahe, R
    [J]. BIOTECHNIQUES, 2003, 35 (01) : 146 - +
  • [7] Direct molecular haplotyping of long-range genomic DNA with M1-PCR
    Ding, CM
    Cantor, CR
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (13) : 7449 - 7453
  • [8] Pyrosequencing™:: An accurate detection platform for single nucleotide polymorphisms
    Fakhrai-Rad, H
    Pourmand, N
    Ronaghi, M
    [J]. HUMAN MUTATION, 2002, 19 (05) : 479 - 485
  • [9] Mutation detection by pyrosequencing:: sequencing of exons 5-8 of the p53 tumor suppressor gene
    Garcia, CA
    Ahmadian, A
    Gharizadeh, B
    Lundeberg, J
    Ronaghi, M
    Nyrén, P
    [J]. GENE, 2000, 253 (02) : 249 - 257
  • [10] Multiple-primer DNA sequencing method
    Gharizadeh, B
    Ghaderi, M
    Donnelly, D
    Amini, B
    Wallin, KL
    Nyrén, P
    [J]. ELECTROPHORESIS, 2003, 24 (7-8) : 1145 - 1151