Quantitative Proteomics Identifies TCF1 as a Negative Regulator of Foxp3 Expression in Conventional T Cells

被引:6
作者
Delacher, Michael [1 ,2 ,3 ]
Barra, Melanie M. [3 ]
Herzig, Yonatan [4 ]
Eichelbaum, Katrin [5 ]
Rafiee, Mahmoud-Reza [5 ]
Richards, David M. [3 ]
Traeger, Ulrike [3 ]
Hofer, Ann-Cathrin [3 ]
Kazakov, Alexander [3 ]
Braband, Kathrin L. [3 ]
Gonzalez, Marina [3 ]
Woehrl, Lukas [2 ]
Schambeck, Kathrin [2 ]
Imbusch, Charles D. [6 ,7 ]
Abramson, Jakub [4 ]
Krijgsveld, Jeroen [5 ,8 ,9 ]
Feuerer, Markus [1 ,2 ,3 ]
机构
[1] Regensburg Univ, Chair Immunol, Franz Josef Strauss Allee 11, D-93053 Regensburg, Germany
[2] Regensburg Ctr Intervent Immunol RCI, Franz Josef Strauss Allee 11, D-93053 Regensburg, Germany
[3] German Canc Res Ctr, Tumor Immunol Program, Immune Tolerance Grp, Neuenheimer Feld 280, D-69120 Heidelberg, Germany
[4] Weizmann Inst Sci, Dept Immunol, 234 Herzl St, IL-76100 Rehovot, Israel
[5] European Mol Biol Lab, Meyerhofstr 1, D-69117 Heidelberg, Germany
[6] Heidelberg Univ, Fac Biosci, Neuenheimer Feld 234, D-69120 Heidelberg, Germany
[7] German Canc Res Ctr, Div Appl Bioinformat, Neuenheimer Feld 581, D-69120 Heidelberg, Germany
[8] German Canc Res Ctr, Prote Stem Cells & Canc, Neuenheimer Feld 581, D-69120 Heidelberg, Germany
[9] Heidelberg Univ, Med Fac, Neuenheimer Feld 672, D-69120 Heidelberg, Germany
基金
欧洲研究理事会;
关键词
INDUCTION; PROTEIN; ENTEROPATHY; ENHANCER; SMAD3; GENE;
D O I
10.1016/j.isci.2020.101127
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Regulatory T cells are important regulators of the immune system and have versatile functions for the homeostasis and repair of tissues. They express the forkhead box transcription factor Foxp3 as a lineage-defining protein. Negative regulators of Foxp3 expression are not well understood. Here, we generated double-stranded DNA probes complementary to the Foxp3 promoter sequence and performed a pull-down with nuclear protein in vitro, followed by elution of bound proteins and quantitative mass spectrometry. Of the Foxp3-promoter-binding transcription factors identified with this approach, one was T cell factor 1 (TCF1). Using viral over-expression, we identified TCF1 as a repressor of Foxp3 expression. In TCF1-deficient animals, increased levels of Foxp3(intermediate)CD25(negative) T cells were identified. CRISPR-Cas9 knockout studies in primary human and mouse conventional CD4 T (T-conv) cells revealed that TCF1 protects T-conv cells from inadvertent Foxp3 expression. Our data implicate a role of TCF1 in suppressing Foxp3 expression in activated T cells.
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页数:41
相关论文
共 60 条
[1]   Conversion of antigen-specific effector/memory T cells into Foxp3-expressing Treg cells by inhibition of CDK8/19 [J].
Akamatsu, Masahiko ;
Mikami, Norihisa ;
Ohkura, Naganari ;
Kawakami, Ryoji ;
Kitagawa, Yohko ;
Sugimoto, Atsushi ;
Hirota, Keiji ;
Nakamura, Naoto ;
Ujihara, Satoru ;
Kurosaki, Toshio ;
Hamaguchi, Hisao ;
Harada, Hironori ;
Xia, Guliang ;
Morita, Yoshiaki ;
Aramori, Ichiro ;
Narumiya, Shuh ;
Sakaguchi, Shimon .
SCIENCE IMMUNOLOGY, 2019, 4 (40)
[2]   Comparative genomics reveals key gain-of-function events in Foxp3 during regulatory T cell evolution [J].
Andersen, Kristian G. ;
Nissen, Jesper K. ;
Betz, Alexander G. .
FRONTIERS IN IMMUNOLOGY, 2012, 3
[3]   Transcription Factor 7 Limits Regulatory T Cell Generation in the Thymus [J].
Barra, Melanie M. ;
Richards, David M. ;
Hansson, Jenny ;
Hofer, Ann-Cathrin ;
De lacher, Michael ;
Hettinger, Jan ;
Krijgsveld, Jeroen ;
Feuerer, Markus .
JOURNAL OF IMMUNOLOGY, 2015, 195 (07) :3058-3070
[4]   Premature Expression of Foxp3 in Double-Negative Thymocytes [J].
Barra, Melanie M. ;
Richards, David M. ;
Hofer, Ann-Cathrin ;
Delacher, Michael ;
Feuerer, Markus .
PLOS ONE, 2015, 10 (05)
[5]   The immune dysregulation, polyendocrinopathy, enteropathy, X-linked syndrome (IPEX) is caused by mutations of FOXP3 [J].
Bennett, CL ;
Christie, J ;
Ramsdell, F ;
Brunkow, ME ;
Ferguson, PJ ;
Whitesell, L ;
Kelly, TE ;
Saulsbury, FT ;
Chance, PF ;
Ochs, HD .
NATURE GENETICS, 2001, 27 (01) :20-21
[6]   Disruption of a new forkhead/winged-helix protein, scurfin, results in the fatal lymphoproliferative disorder of the scurfy mouse [J].
Brunkow, ME ;
Jeffery, EW ;
Hjerrild, KA ;
Paeper, B ;
Clark, LB ;
Yasayko, SA ;
Wilkinson, JE ;
Galas, D ;
Ziegler, SF ;
Ramsdell, F .
NATURE GENETICS, 2001, 27 (01) :68-73
[7]   Runx proteins regulate Foxp3 expression [J].
Bruno, Ludovica ;
Mazzarella, Luca ;
Hoogenkamp, Maarten ;
Hertweck, Arnulf ;
Cobb, Bradley S. ;
Sauer, Stephan ;
Hadjur, Suzana ;
Leleu, Marion ;
Naoe, Yoshinori ;
Telfer, Janice C. ;
Bonifer, Constanze ;
Taniuchi, Ichiro ;
Fisher, Amanda G. ;
Merkenschlager, Matthias .
JOURNAL OF EXPERIMENTAL MEDICINE, 2009, 206 (11) :2329-2337
[8]   IL-2 receptor β-dependent STAT5 activation is required for the development of Foxp3+ regulatory T cells [J].
Burchill, Matthew A. ;
Yang, Jianying ;
Vogtenhuber, Christine ;
Blazar, Bruce R. ;
Farrar, Michael A. .
JOURNAL OF IMMUNOLOGY, 2007, 178 (01) :280-290
[9]   CIRCUMVENTION OF TOLERANCE FOR THE NUCLEAR T-CELL PROTEIN TCF-1 BY IMMUNIZATION OF TCF-1 KNOCK-OUT MICE [J].
CASTROP, J ;
VERBEEK, S ;
HOFHUIS, F ;
CLEVERS, H .
IMMUNOBIOLOGY, 1995, 193 (2-4) :281-287
[10]   Proteomic Analyses of Human Regulatory T Cells Reveal Adaptations in Signaling Pathways that Protect Cellular Identity [J].
Cuadrado, Eloy ;
van den Biggelaar, Maartje ;
de Kivit, Sander ;
Chen, Yi-yen ;
Slot, Manon ;
Doubal, Ihsane ;
Meijer, Alexander ;
van Lier, Rene A. W. ;
Borst, Jannie ;
Amsen, Derk .
IMMUNITY, 2018, 48 (05) :1046-+