Highly Efficient, Rapid and Co-CRISPR-Independent Genome Editing in Caenorhabditis elegans

被引:32
作者
Prior, Harriet [1 ]
Jawad, Ali K. [1 ]
MacConnachie, Lauren [2 ]
Beg, Asim A. [1 ,2 ]
机构
[1] Univ Michigan, Neurosci Program, 1150 W Med Ctr Dr,1220D MSRB 3, Ann Arbor, MI 48109 USA
[2] Univ Michigan, Dept Pharmacol, 1150 W Med Ctr Dr,1220D MSRB 3, Ann Arbor, MI 48109 USA
来源
G3-GENES GENOMES GENETICS | 2017年 / 7卷 / 11期
关键词
CRISPR; Cas9; ribonucleoprotein; Caenorhabditis elegans; disease variants; INTEGRATION; KNOCKOUT; TARGET;
D O I
10.1534/g3.117.300216
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
We describe a rapid and highly efficient method to generate point mutations in Caenorhabditis elegans using direct injection of CRISPR-Cas9 ribonucleoproteins. This versatile method does not require sensitized genetic backgrounds or co-CRISPR selection-based methods, and represents a single strategy that can be used for creating genomic point mutations, regardless of location. As proof of principle, we show that knock-in mutants more faithfully report variant-associated phenotypes as compared to transgenic overexpression. Data for nine knock-in mutants across five genes are presented that demonstrate high editing efficiencies (60%), a reduced screening workload (24 F1 progeny), and a rapid timescale (4-5 d). This optimized method simplifies genome engineering and is readily adaptable to other model systems.
引用
收藏
页码:3693 / 3698
页数:6
相关论文
共 20 条
[1]   Structural basis of PAM-dependent target DNA recognition by the Cas9 endonuclease [J].
Anders, Carolin ;
Niewoehner, Ole ;
Duerst, Alessia ;
Jinek, Martin .
NATURE, 2014, 513 (7519) :569-+
[2]   Efficient Marker-Free Recovery of Custom Genetic Modifications with CRISPR/Cas9 in Caenorhabditis elegans [J].
Arribere, Joshua A. ;
Bell, Ryan T. ;
Fu, Becky X. H. ;
Artiles, Karen L. ;
Hartman, Phil S. ;
Fire, Andrew Z. .
GENETICS, 2014, 198 (03) :837-U842
[3]   A Balanced Look at the Implications of Genomic (and Other "Omics") Testing for Disease Diagnosis and Clinical Care [J].
Boyd, Scott D. ;
Galli, Stephen J. ;
Schrijver, Iris ;
Zehnder, James L. ;
Ashley, Euan A. ;
Merker, Jason D. .
GENES, 2014, 5 (03) :748-766
[4]   Heritable Gene Knockout in Caenorhabditis elegans by Direct Injection of Cas9-sgRNA Ribonucleoproteins [J].
Cho, Seung Woo ;
Lee, Jihyun ;
Carroll, Dana ;
Kim, Jin-Soo ;
Lee, Junho .
GENETICS, 2013, 195 (03) :1177-+
[5]   Optimizing sgRNA structure to improve CRISPR-Cas9 knockout efficiency [J].
Dang, Ying ;
Jia, Gengxiang ;
Choi, Jennie ;
Ma, Hongming ;
Anaya, Edgar ;
Ye, Chunting ;
Shankar, Premlata ;
Wu, Haoquan .
GENOME BIOLOGY, 2015, 16
[6]   CRISPR-Based Methods for Caenorhabditis elegans Genome Engineering [J].
Dickinson, Daniel J. ;
Goldstein, Bob .
GENETICS, 2016, 202 (03) :885-901
[7]   Rational design of highly active sgRNAs for CRISPR-Cas9-mediated gene inactivation [J].
Doench, John G. ;
Hartenian, Ella ;
Graham, Daniel B. ;
Tothova, Zuzana ;
Hegde, Mudra ;
Smith, Ian ;
Sullender, Meagan ;
Ebert, Benjamin L. ;
Xavier, Ramnik J. ;
Root, David E. .
NATURE BIOTECHNOLOGY, 2014, 32 (12) :1262-U130
[8]   The new frontier of genome engineering with CRISPR-Cas9 [J].
Doudna, Jennifer A. ;
Charpentier, Emmanuelle .
SCIENCE, 2014, 346 (6213) :1077-+
[9]  
Evans TC., 2006, WORMBOOK, DOI DOI 10.1895/WORMBOOK.1.108.1
[10]   Exciting Prospects for Precise Engineering of Caenorhabditis elegans Genomes with CRISPR/Cas9 [J].
Frokjaer-Jensen, Christian .
GENETICS, 2013, 195 (03) :635-642