TTC22 promotes m6A-mediated WTAP expression and colon cancer metastasis in an RPL4 binding-dependent pattern

被引:19
作者
You, Abin [1 ,2 ]
Tian, Wei [1 ]
Yuan, Hongfan [1 ]
Gu, Liankun [1 ]
Zhou, Jing [1 ]
Deng, Dajun [1 ,3 ]
机构
[1] Peking Univ Canc Hosp & Inst, Div Etiol, Key Lab Carcinogenesis & Translat Res MOE Beijing, Beijing 100142, Peoples R China
[2] Xiamen Univ, Affiliated Hosp 1, Xiamen Key Lab Antitumor Drug Transformat Res, Dept Med Oncol, Xiamen 361003, Fujian, Peoples R China
[3] Nanjing Med Univ, Collaborat Innovat Ctr Canc Personalized Med, Nanjing 211166, Peoples R China
基金
中国国家自然科学基金;
关键词
MESSENGER-RNA METHYLATION; GENE-EXPRESSION; PROTEIN L4; M(6)A; N-6-METHYLADENOSINE; COMPLEX;
D O I
10.1038/s41388-022-02402-x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
WTAP, an essential component of the RNA N-6-methyladenosine (m6A) modification complex, guides METLL3-METLL14 heteroduplexes to target RNAs in the nuclear speckles of mammalian cells. Here, we show that TTC22 is widely coexpressed with WTAP and FTO in many human tissues by mining Genotype-Tissue Expression (GTEx) datasets. Our results indicate that the direct interaction of TTC22 with 60S ribosomal protein L4 (RPL4) promotes the binding of WTAP mRNA to RPL4, enhances the stability and translation efficiency of WTAP mRNA, and consequently increases the level of WTAP protein. Also, WTAP mRNA itself is an m6A target and YTHDF1 is characterized as an essential m6A binding protein interacting with m6A-modified WTAP mRNA. TTC22 triggers a positive feedback loop between WTAP expression and WTAP mRNA m6A modification, leading to an increased m6A level in total RNA. The knockdown of RPL4, WTAP, or YTHDF1 expression diminishes the TTC22-induced increase in the m6A level of total RNA. Thus, TTC22 caused dramatic expression changes in genes related to metabolic pathways, ribosomal biogenesis, the RNA spliceosome, and microorganism infections. Importantly, TTC22 upregulates the expression of SNAI1 by increasing m6A level and thus promotes lung metastases of colon cancer cells in mice. In conclusion, our study showed that TTC22 upregulates WTAP and SNAI1 expression, which contributes to TTC22-induced colon cancer metastasis.
引用
收藏
页码:3925 / 3938
页数:14
相关论文
共 43 条
[1]   RNA Methylation by the MIS Complex Regulates a Cell Fate Decision in Yeast [J].
Agarwala, Sudeep D. ;
Blitzblau, Hannah G. ;
Hochwagen, Andreas ;
Fink, Gerald R. .
PLOS GENETICS, 2012, 8 (06)
[2]   The midbody interactome reveals unexpected roles for PP1 phosphatases in cytokinesis [J].
Capalbo, Luisa ;
Bassi, Zuni, I ;
Geymonat, Marco ;
Todesca, Sofia ;
Copoiu, Liviu ;
Enright, Anton J. ;
Callaini, Giuliano ;
Riparbelli, Maria Giovanna ;
Yu, Lu ;
Choudhary, Jyoti S. ;
Ferrero, Enrico ;
Wheatley, Sally ;
Douglas, Max E. ;
Mishima, Masanori ;
D'Avino, Pier Paolo .
NATURE COMMUNICATIONS, 2019, 10 (1)
[3]   Alterations in GRHL2-OVOL2-ZEB1 axis and aberrant activation of Wnt signaling lead to altered gene transcription in posterior polymorphous corneal dystrophy [J].
Chung, Doug D. ;
Zhang, Wenlin ;
Jatavallabhula, Kavya ;
Barrington, Alice ;
Jung, JooYeon ;
Aldave, Anthony J. .
EXPERIMENTAL EYE RESEARCH, 2019, 188
[4]   RNA N6-methyladenosine modification in cancers: current status and perspectives [J].
Deng, Xiaolan ;
Su, Rui ;
Weng, Hengyou ;
Huang, Huilin ;
Li, Zejuan ;
Chen, Jianjun .
CELL RESEARCH, 2018, 28 (05) :507-517
[5]   Transcriptome-wide mapping of N6-methyladenosine by m6A-seq based on immunocapturing and massively parallel sequencing [J].
Dominissini, Dan ;
Moshitch-Moshkovitz, Sharon ;
Salmon-Divon, Mali ;
Amariglio, Ninette ;
Rechavi, Gideon .
NATURE PROTOCOLS, 2013, 8 (01) :176-189
[6]   Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq [J].
Dominissini, Dan ;
Moshitch-Moshkovitz, Sharon ;
Schwartz, Schraga ;
Salmon-Divon, Mali ;
Ungar, Lior ;
Osenberg, Sivan ;
Cesarkas, Karen ;
Jacob-Hirsch, Jasmine ;
Amariglio, Ninette ;
Kupiec, Martin ;
Sorek, Rotem ;
Rechavi, Gideon .
NATURE, 2012, 485 (7397) :201-U84
[7]   RNA modifications modulate gene expression during development [J].
Frye, Michaela ;
Harada, Bryan T. ;
Behm, Mikaela ;
He, Chuan .
SCIENCE, 2018, 361 (6409) :1346-1349
[8]   m6A mRNA methylation facilitates resolution of naive pluripotency toward differentiation [J].
Geula, Shay ;
Moshitch-Moshkovitz, Sharon ;
Dominissini, Dan ;
Mansour, Abed AlFatah ;
Kol, Nitzan ;
Salmon-Divon, Mali ;
Hershkovitz, Vera ;
Peer, Eyal ;
Mor, Nofar ;
Manor, Yair S. ;
Ben-Haim, Moshe Shay ;
Eyal, Eran ;
Yunger, Sharon ;
Pinto, Yishay ;
Jaitin, Diego Adhemar ;
Viukov, Sergey ;
Rais, Yoach ;
Krupalnik, Vladislav ;
Chomsky, Elad ;
Zerbib, Mirie ;
Maza, Itay ;
Rechavi, Yoav ;
Massarwa, Rada ;
Hanna, Suhair ;
Amit, Ido ;
Levanon, Erez Y. ;
Amariglio, Ninette ;
Stern-Ginossar, Noam ;
Novershtern, Noa ;
Rechavi, Gideon ;
Hanna, Jacob H. .
SCIENCE, 2015, 347 (6225) :1002-1006
[9]   Ribosomal protein L4 is a novel regulator of the MDM2-p53 loop [J].
He, Xia ;
Li, Yuhuang ;
Dai, Mu-Shui ;
Sun, Xiao-Xin .
ONCOTARGET, 2016, 7 (13) :16217-16226
[10]   Identification of Wilms' Tumor 1-associating Protein Complex and Its Role in Alternative Splicing and the Cell Cycle [J].
Horiuchi, Keiko ;
Kawamura, Takeshi ;
Iwanari, Hiroko ;
Ohashi, Riuko ;
Naito, Makoto ;
Kodama, Tatsuhiko ;
Hamakubo, Takao .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2013, 288 (46) :33292-33302