Multilocus analysis of a taxonomically densely sampled dataset reveal extensive non-monophyly in the avian family Locustellidae

被引:28
作者
Alstrom, Per [1 ]
Fregin, Silke [2 ,3 ]
Norman, Janette A. [4 ,5 ]
Ericson, Per G. P. [6 ,7 ]
Christidis, Les [4 ,5 ,8 ]
Olsson, Urban [9 ]
机构
[1] Swedish Univ Agr Sci, Swedish Species Informat Ctr, SE-75007 Uppsala, Sweden
[2] Univ Greifswald, Inst Zool, D-17489 Greifswald, Germany
[3] Univ Greifswald, Zool Museum, D-17489 Greifswald, Germany
[4] Museum Victoria, Dept Sci, Melbourne, Vic 3001, Australia
[5] Univ Melbourne, Dept Genet, Parkville, Vic 3052, Australia
[6] Swedish Museum Nat Hist, Dept Vertebrate Zool, SE-10405 Stockholm, Sweden
[7] Swedish Museum Nat Hist, Mol Systemat Lab, SE-10405 Stockholm, Sweden
[8] So Cross Univ, Natl Marine Sci Ctr, Coffs Harbour, NSW 2450, Australia
[9] Univ Gothenburg, Dept Zool, SE-40530 Gothenburg, Sweden
基金
瑞典研究理事会;
关键词
Species trees; Gene trees; Phylogeny; Concatenation; BEST; MrBayes; Classification; SPECIES TREES; MOLECULAR SYSTEMATICS; PHYLOGENETIC ANALYSIS; BAYESIAN-INFERENCE; AVES; DNA; PASSERIFORMES; MODEL; MRBAYES;
D O I
10.1016/j.ympev.2010.12.012
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The phylogeny of most of the species in the avian passerine family Locustellidae is inferred using a Bayesian species tree approach (Bayesian Estimation of Species Trees, BEST), as well as a traditional Bayesian gene tree method (MrBayes), based on a dataset comprising one mitochondrial and four nuclear loci. The trees inferred by the different methods agree fairly well in topology, although in a few cases there are marked differences. Some of these discrepancies might be due to convergence problems for BEST (despite up to 1 x 10(9) iterations). The phylogeny strongly disagrees with the current taxonomy at the generic level, and we propose a revised classification that recognizes four instead of seven genera. These results emphasize the well known but still often neglected problem of basing classifications on non-cladistic evaluations of morphological characters. An analysis of an extended mitochondrial dataset with multiple individuals from most species, including many subspecies, suggest that several taxa presently treated as subspecies or as monotypic species as well as a few taxa recognized as separate species are in need of further taxonomic work. (C) 2011 Elsevier Inc. All rights reserved.
引用
收藏
页码:513 / 526
页数:14
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