Viroids: Survivors from the RNA World?

被引:116
作者
Flores, Ricardo [1 ]
Gago-Zachert, Selma [2 ]
Serra, Pedro [1 ]
Sanjuan, Rafael [3 ]
Elena, Santiago F. [1 ,4 ]
机构
[1] UPV CSIC, Inst Biol Mol & Celular Plantas, Valencia 46022, Spain
[2] Leibniz Inst Pflanzenbiochem, Abt Mol Signalverarbeitung, D-06120 Halle, Saale, Germany
[3] Univ Valencia, Inst Cavanilles Biodiversidad & Biol Evolut, Valencia 46980, Spain
[4] Santa Fe Inst, Santa Fe, NM 87501 USA
来源
ANNUAL REVIEW OF MICROBIOLOGY, VOL 68 | 2014年 / 68卷
基金
欧洲研究理事会;
关键词
viroid-like satellite RNAs; hepatitis delta virus; catalytic RNAs; hammerhead ribozymes; small noncoding RNAs; SILICO PREDICTED ROBUSTNESS; RETROVIROID-LIKE ELEMENT; CLEAVE IN-VITRO; DELTA VIRUS-RNA; SATELLITE RNAS; NUCLEOTIDE-SEQUENCE; SECONDARY STRUCTURE; SELF-CLEAVAGE; FUNCTIONAL COMPLEXITY; MESSENGER-RNA;
D O I
10.1146/annurev-micro-091313-103416
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Because RNA can be a carrier of genetic information and a biocatalyst, there is a consensus that it emerged before DNA and proteins, which eventually assumed these roles and relegated RNA to intermediate functions. If such a scenario-the so-called RNA world-existed, we might hope to find its relics in our present world. The properties of viroids that make them candidates for being survivors of the RNA world include those expected for primitive RNA replicons: (a) small size imposed by error-prone replication, (b) high G + C content to increase replication fidelity, (c) circular structure for assuring complete replication without genomic tags, (d) structural periodicity for modular assembly into enlarged genomes, (e) lack of protein-coding ability consistent with a ribosome-free habitat, and (f) replication mediated in some by ribozymes, the fingerprint of the RNA world. With the advent of DNA and proteins, those protoviroids lost some abilities and became the plant parasites we now know.
引用
收藏
页码:395 / 414
页数:20
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