Good-Enough RFLP Matcher (GERM) program

被引:25
作者
Dickie, IA
Avis, PG
McLaughlin, DJ
Reich, PB
机构
[1] Univ Minnesota, Dept Forest Resources, St Paul, MN 55108 USA
[2] Univ Minnesota, Dept Plant Biol, St Paul, MN 55108 USA
关键词
ectomycorrhiza; fungi; identification;
D O I
10.1007/s00572-003-0225-x
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
A spreadsheet-based program (Good-Enough RFLP Matcher or GERM) is presented that matches unknown restriction fragment length polymorphism (RFLP) patterns of ectomycorrhizal fungi to a database of known ectomycorrhizal fungi. The program uses three simple methods to determine whether a sample matches a known: (1) Forward Matching: whether every band in the unknown is present in a known sample within a given error range; (2) Backward Matching: whether every band in the known sample is present in the unknown within a given error range; (3) Sum of Bands: whether the sum of all bands in the known and unknown are similar within a given error range. The program is available through the web page of this journal.
引用
收藏
页码:171 / 172
页数:2
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