Francisella salimarina sp. nov., isolated from coastal seawater

被引:16
作者
Li, Liang-Hui [1 ]
Luo, Hai-Min [1 ]
Feng, Jun-Hui [1 ]
Ming, Yu-Zhen [2 ,3 ]
Zheng, Min-Ling [1 ]
Deng, Guang-Yuan [1 ,4 ]
Chen, Cha [1 ,4 ]
Li, Wen-Jun [2 ,3 ,5 ]
Xiao, Min [2 ,3 ]
Qu, Ping-Hua [1 ,4 ]
机构
[1] Guangzhou Univ Chinese Med, Clin Med Coll 2, Guangzhou 510006, Peoples R China
[2] Sun Yat Sen Univ, Guangdong Prov Key Lab Plant Resources, State Key Lab Biocontrol, Sch Life Sci, Guangzhou 510275, Peoples R China
[3] Sun Yat Sen Univ, Southern Marine Sci & Engn Guangdong Lab Zhuhai, Sch Life Sci, Guangzhou 510275, Peoples R China
[4] Univ Chinese Med, Guangdong Prov Hosp Tradit Chinese Med, Affiliated Hosp Guangzhou 2, Dept Clin Lab, Guangzhou 510006, Peoples R China
[5] Xinjiang Inst Ecol & Geog, CAS Key Lab Biogeog & Bioresource Arid Land, Urumqi 830011, Peoples R China
关键词
Francisella salimarina sp.nov; polyphasic taxonomy; coastal seawater; FORMERLY YERSINIA-PHILOMIRAGIA; EMENDED DESCRIPTION; MAXIMUM-LIKELIHOOD; SUBSP-NOV; COMB; NOV; GEN; NOV; TULARENSIS; TULAREMIA; SEQUENCES; IDENTIFICATION;
D O I
10.1099/ijsem.0.004164
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Four strains (SYSU SYW-1(T), SYW-2, SYW-3 and XLW-1) were isolated from seawater near the shore in Guangdong Province, China. Cells were Gram-stain-negative, aerobic, non-motile and non-spore-forming. Growth was observed at a temperature range of 16-40 degrees C (optimum, 32 degrees C), a pH range of 4-8 (optimum, pH 7) and in the presence of up to 10% (w/v) NaCl. The major polar lipids were diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine and an unidentified phospholipid. The respiratory quinone was ubiquinone 8 (UQ-8), and the predominant fatty acids were C-19:0 3-OH, C-1(0:)0, C-14:0 and C-18:1 omega 9c. Comparison of 16S rRNA gene and genome sequences confirmed that these strains represented a novel member of the genus Francisella, with less than 98.8% 16S rRNA gene sequence similarity and less than 95% genomic average nucleotide identity to recognized Francisella species. The phylogenetic tree based on 16S rRNA gene sequences and the protein-concatamer tree based on a concatenation of 28 protein marker sequences both indicated that the strains clustered with 'Francisella saline' TX07-7308 and 'Francisella marina' E95-16, but formed a distinct lineage group among the other members of the genus Francisella. The DNA G+C contents of the four strains were determined to be 32.9, 32.7, 32.9 and 32.9%, respectively (genome). On the basis of phenotypic and genotypic features, the strains are considered to represent a novel species of the genus Francisella, for which the name Francisella salimarina sp. nov. is proposed. The type strain is SYSU SYW-1(T) (=CGMCC 1.17031(T)=NBRC 113781(T)).
引用
收藏
页码:3264 / 3272
页数:9
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