Advances in hyphenated analytical techniques for shotgun proteome and peptidome analysis - A review

被引:44
作者
Hu, Lianghai [1 ]
Ye, Mingliang [1 ]
Jiang, Xiaogang [1 ]
Feng, Shun [1 ]
Zou, Hanfa [1 ]
机构
[1] Chinese Acad Sci, Dalian Inst Chem Phys, Natl Chromatog R&A Ctr, Grad Sch, Dalian 116023, Peoples R China
关键词
proteomics; peptidomics; hyphenated techniques; multidimensional separation; liquid chromatography-mass spectrometry; review;
D O I
10.1016/j.aca.2007.07.046
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Proteomics is defined as the analysis of part or all of the protein components of a complex biological system (a cell, organ or tissue) at a given moment. Due to the huge number of proteins encoded by the genome, novel analytical techniques must be developed to meet the need of large scale analysis. This has led to the hyphenation of multiple techniques to achieve this object. Here current status of the hyphenated analytical techniques of one-dimensional and multidimensional liquid chromatography-mass spectrometry for shotgun proteomic analysis is reviewed, and on-line techniques for automated sample preparation and injection are also covered. In addition, the hyphenated techniques for peptidome analysis are also covered. (c) 2007 Elsevier B.V. All rights reserved.
引用
收藏
页码:193 / 204
页数:12
相关论文
共 140 条
  • [1] The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins
    Adachi, Jun
    Kumar, Chanchal
    Zhang, Yanling
    Olsen, Jesper V.
    Mann, Matthias
    [J]. GENOME BIOLOGY, 2006, 7 (09)
  • [2] Mass spectrometry-based proteomics
    Aebersold, R
    Mann, M
    [J]. NATURE, 2003, 422 (6928) : 198 - 207
  • [3] Applications of monolithic silica capillary columns in proteomics
    Barroso, B
    Lubda, D
    Bischoff, R
    [J]. JOURNAL OF PROTEOME RESEARCH, 2003, 2 (06) : 633 - 642
  • [4] Evaluation and optimization of ZIC-HILIC-RP as an alternative MudPIT strategy
    Boersema, Paul J.
    Divecha, Nullin
    Heck, Albert J. R.
    Mohammed, Shabaz
    [J]. JOURNAL OF PROTEOME RESEARCH, 2007, 6 (03) : 937 - 946
  • [5] High-performance liquid chromatography integrated solid-phase extraction in bioanalysis using restricted access precolumn packings
    Boos, KS
    Grimm, CH
    [J]. TRAC-TRENDS IN ANALYTICAL CHEMISTRY, 1999, 18 (03) : 175 - 180
  • [6] Applications of silica-based monolithic HPLC columns
    Cabrera, K
    [J]. JOURNAL OF SEPARATION SCIENCE, 2004, 27 (10-11) : 843 - 852
  • [7] Trypsin-based monolithic bioreactor coupled on-line with LC/MS/MS system for protein digestion and variant identification in standard solutions and serum samples
    Calleri, E
    Temporini, C
    Perani, E
    De Palma, A
    Lubda, D
    Mellerio, G
    Sala, A
    Galliano, M
    Caccialanza, G
    Massolini, G
    [J]. JOURNAL OF PROTEOME RESEARCH, 2005, 4 (02) : 481 - 490
  • [8] Capillary isoelectric focusing-based multidimensional concentration/separation platform for proteome analysis
    Chen, JZ
    Balgley, BM
    DeVoe, DL
    Lee, CS
    [J]. ANALYTICAL CHEMISTRY, 2003, 75 (13) : 3145 - 3152
  • [9] Dynamic enhancements of sample loading and analyte concentration in capillary isoelectric focusing for proteome studies
    Chen, JZ
    Gao, J
    Lee, CS
    [J]. JOURNAL OF PROTEOME RESEARCH, 2003, 2 (03) : 249 - 254
  • [10] Chen JZ, 2002, ELECTROPHORESIS, V23, P3143, DOI 10.1002/1522-2683(200209)23:18<3143::AID-ELPS3143>3.0.CO