A Dynamic View of Trauma/Hemorrhage-Induced Inflammation in Mice: Principal Drivers and Networks

被引:82
作者
Mi, Qi [1 ,5 ]
Constantine, Gregory [2 ,5 ]
Ziraldo, Cordelia [3 ]
Solovyev, Alexey [2 ]
Torres, Andres [3 ]
Namas, Rajaie [3 ]
Bentley, Timothy [4 ]
Billiar, Timothy R. [3 ]
Zamora, Ruben [3 ]
Puyana, Juan Carlos [3 ,5 ]
Vodovotz, Yoram [3 ,5 ]
机构
[1] Univ Pittsburgh, Dept Sports Med & Nutr, Pittsburgh, PA 15260 USA
[2] Univ Pittsburgh, Dept Math, Pittsburgh, PA 15260 USA
[3] Univ Pittsburgh, Dept Surg, Pittsburgh, PA USA
[4] Off Naval Res, Arlington, VA 22217 USA
[5] Univ Pittsburgh, Ctr Inflammat & Regenerat Modeling, McGowan Inst Regenerat Med, Pittsburgh, PA USA
基金
美国国家卫生研究院;
关键词
KERATINOCYTE-DERIVED CHEMOKINE; NECROSIS-FACTOR RECEPTORS; ENDOTHELIAL GROWTH-FACTOR; PLASMA CYTOKINE LEVELS; HEMORRHAGIC-SHOCK; SEVERE TRAUMA; SYSTEMIC INFLAMMATION; IMMUNE-RESPONSE; IN-SILICO; INJURY;
D O I
10.1371/journal.pone.0019424
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Complex biological processes such as acute inflammation induced by trauma/hemorrhagic shock/(T/HS) are dynamic and multi-dimensional. We utilized multiplexing cytokine analysis coupled with data-driven modeling to gain a systems perspective into T/HS. Methodology/Principal Findings: Mice were subjected to surgical cannulation trauma (ST) +/- hemorrhagic shock (HS; 25 mmHg), and followed for 1, 2, 3, or 4 h in each case. Serum was assayed for 20 cytokines and NO2-/NO3-. These data were analyzed using four data-driven methods (Hierarchical Clustering Analysis [HCA], multivariate analysis [MA], Principal Component Analysis [PCA], and Dynamic Network Analysis [DyNA]). Using HCA, animals subjected to ST vs. ST + HS could be partially segregated based on inflammatory mediator profiles, despite a large overlap. Based on MA, interleukin [IL]-12p40/p70 (IL-12.total), monokine induced by interferon-gamma (CXCL-9) [MIG], and IP-10 were the best discriminators between ST and ST/HS. PCA suggested that the inflammatory mediators found in the three main principal components in animals subjected to ST were IL-6, IL-10, and IL-13, while the three principal components in ST + HS included a large number of cytokines including IL-6, IL-10, keratinocyte-derived cytokine (CXCL-1) [KC], and tumor necrosis factor-alpha [TNF-alpha]. DyNA suggested that the circulating mediators produced in response to ST were characterized by a high degree of interconnection/complexity at all time points; the response to ST + HS consisted of different central nodes, and exhibited zero network density over the first 2 h with lesser connectivity vs. ST at all time points. DyNA also helped link the conclusions from MA and PCA, in that central nodes consisting of IP-10 and IL-12 were seen in ST, while MIG and IL-6 were central nodes in ST + HS. Conclusions/Significance: These studies help elucidate the dynamics of T/HS-induced inflammation, complementing other forms of dynamic mechanistic modeling. These methods should be applicable to the analysis of other complex biological processes.
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页数:12
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