Re-emergence of genotype G9 during a five-and-a-half-year period in Turkish children with rotavirus diarrhea

被引:11
作者
Bozdayi, Gulendam [1 ]
Altay, Aylin [1 ]
Yahiro, Takaaki [2 ]
Ahmed, Sharnali [2 ]
Meral, Melda [1 ]
Dogan, Bora [3 ,4 ]
Dinc, Bedia
Yeniaras, Ayca [5 ]
Bilge, Yildiz Dallar [5 ]
Ahmed, Kamruddin [2 ,6 ]
机构
[1] Gazi Univ, Dept Med Microbiol, Fac Med, Ankara, Turkey
[2] Univ Malaysia Sabah, Fac Med & Hlth Sci, Dept Pathobiol & Med Diagnost, Kota Kinabalu, Sabah, Malaysia
[3] Alanya State Hosp, Dept Microbiol, Antalya, Turkey
[4] T Yuksek Ihtisas Hosp, Dept Med Microbiol, Ankara, Turkey
[5] Ankara Training & Educ Hosp, Minist Hlth, Dept Pediat, Ankara, Turkey
[6] Oita Univ, Fac Med, Res Promot Inst, Dept Microbiol, Yufu, Oita, Japan
关键词
Rotavirus; Prevalence; Genotypes; Children; Turkey; VACCINE; STRAINS; GASTROENTERITIS; PROTECTION; EFFICACY;
D O I
10.1007/s00705-016-2986-5
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
This study was done to understand the dynamics of rotavirus genotype distribution in Turkish children. Samples were collected from January 2006 through August 2011 from children at a hospital in Ankara. Rotavirus was detected in 28 % (241/889) of the samples. Genotype G9P[8] was predominant (28 %), followed by G1P[8] (16.3 %) and G2P[8] (15.9 %). G9 was absent in the samples from 2006 and 2007 and then re-emerged in 2008 and increased gradually. Phylogenetic analysis showed that Turkish G9 rotaviruses of the present study formed a sublineage with strains from Italy and Ethiopia, possibly indicating spread of a clone in these countries.
引用
收藏
页码:2879 / 2884
页数:6
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