Graph-guided joint prediction of class label and clinical scores for the Alzheimer's disease

被引:30
作者
Yu, Guan [1 ]
Liu, Yufeng [1 ,2 ,3 ]
Shen, Dinggang [4 ,5 ,6 ]
机构
[1] Univ N Carolina, Dept Stat & Operat Res, Chapel Hill, NC 27599 USA
[2] Univ N Carolina, Carolina Ctr Genome Sci, Chapel Hill, NC USA
[3] Univ N Carolina, Dept Biostat, Chapel Hill, NC USA
[4] Univ N Carolina, Dept Radiol, Chapel Hill, NC 27599 USA
[5] Univ N Carolina, BRIC, Chapel Hill, NC 27599 USA
[6] Korea Univ, Dept Brain & Cognit Engn, Seoul 02841, South Korea
基金
美国国家卫生研究院;
关键词
Alzheimer's disease; Group Lasso; Magnetic resonance imaging (MRI); Multi-task learning; Partial correlation; Positron emission tomography ( PET); Undirected graph; MILD COGNITIVE IMPAIRMENT; FUNCTIONAL CONNECTIVITY; CSF BIOMARKERS; MR-IMAGES; REGRESSION; SELECTION; LASSO; AD; VARIABLES; PATTERNS;
D O I
10.1007/s00429-015-1132-6
中图分类号
R602 [外科病理学、解剖学]; R32 [人体形态学];
学科分类号
100101 ;
摘要
Accurate diagnosis of Alzheimer's disease and its prodromal stage, i.e., mild cognitive impairment, is very important for early treatment. Over the last decade, various machine learning methods have been proposed to predict disease status and clinical scores from brain images. It is worth noting that many features extracted from brain images are correlated significantly. In this case, feature selection combined with the additional correlation information among features can effectively improve classification/regression performance. Typically, the correlation information among features can be modeled by the connectivity of an undirected graph, where each node represents one feature and each edge indicates that the two involved features are correlated significantly. In this paper, we propose a new graph-guided multi-task learning method incorporating this undirected graph information to predict multiple response variables (i.e., class label and clinical scores) jointly. Specifically, based on the sparse undirected feature graph, we utilize a new latent group Lasso penalty to encourage the correlated features to be selected together. Furthermore, this new penalty also encourages the intrinsic correlated tasks to share a common feature subset. To validate our method, we have performed many numerical studies using simulated datasets and the Alzheimer's Disease Neuroimaging Initiative dataset. Compared with the other methods, our proposed method has very promising performance.
引用
收藏
页码:3787 / 3801
页数:15
相关论文
共 37 条
[1]  
[Anonymous], 2013, INT J ADV MANUF TECH, DOI DOI 10.1007/S00170-013-5017-7
[2]  
[Anonymous], 2006, Journal of the Royal Statistical Society, Series B
[3]   Healthy brain aging: A meeting report from the Sylvan M. Cohen Annual Retreat of the University of Pennsylvania Institute on Aging [J].
Bain, Lisa J. ;
Jedrziewski, Kathy ;
Morrison-Bogorad, Marcelle ;
Albert, Marilyn ;
Cotman, Carl ;
Hendrie, Hugh ;
Trojanowski, John Q. .
ALZHEIMERS & DEMENTIA, 2008, 4 (06) :443-446
[4]   Longitudinal changes of CSF biomarkers in memory clinic patients [J].
Bouwman, F. H. ;
van der Flier, W. M. ;
Schoonenboom, N. S. M. ;
van Elk, E. J. ;
Kok, A. ;
Rijmen, F. ;
Blankenstein, M. A. ;
Scheltens, P. .
NEUROLOGY, 2007, 69 (10) :1006-1011
[5]   Forecasting the global burden of Alzheimer's disease [J].
Brookmeyer, Ron ;
Johnson, Elizabeth ;
Ziegler-Graham, Kathryn ;
Arrighi, H. Michael .
ALZHEIMERS & DEMENTIA, 2007, 3 (03) :186-191
[6]   A Constrained l1 Minimization Approach to Sparse Precision Matrix Estimation [J].
Cai, Tony ;
Liu, Weidong ;
Luo, Xi .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2011, 106 (494) :594-607
[7]   Semi-Supervised Multimodal Relevance Vector Regression Improves Cognitive Performance Estimation from Imaging and Biological Biomarkers [J].
Cheng, Bo ;
Zhang, Daoqiang ;
Chen, Songcan ;
Kaufer, Daniel I. ;
Shen, Dinggang .
NEUROINFORMATICS, 2013, 11 (03) :339-353
[8]   Hippocampal formation glucose metabolism and volume losses in MCI and AD [J].
De Santi, S ;
de Leon, MJ ;
Rusinek, H ;
Convit, A ;
Tarshish, CY ;
Roche, A ;
Tsui, WH ;
Kandil, E ;
Boppana, M ;
Daisley, K ;
Wang, GJ ;
Schlyer, D ;
Fowler, J .
NEUROBIOLOGY OF AGING, 2001, 22 (04) :529-539
[9]   Different regional patterns of cortical thinning in Alzheimer's disease and frontotemporal dementia [J].
Du, An-Tao ;
Schuff, Norbert ;
Kramer, Joel H. ;
Rosen, Howard J. ;
Gorno-Tempini, Maria Luisa ;
Rankin, Katherine ;
Miller, Bruce L. ;
Weiner, Michael W. .
BRAIN, 2007, 130 :1159-1166
[10]  
Duchesne S, 2005, LECT NOTES COMPUT SC, V3749, P392