Fast Proton Titration Scheme for Multiscale Modeling of Protein Solutions

被引:39
作者
Reis Teixeira, Andre Azevedo [1 ]
Lund, Mikael [2 ]
Barroso da Silva, Fernando Luis [1 ,2 ]
机构
[1] Univ Sao Paulo, FCFRP, Dept Chem & Phys, BR-14040903 Ribeirao Preto, SP, Brazil
[2] Lund Univ, Dept Theoret Chem, Ctr Chem, S-22100 Lund, Sweden
基金
巴西圣保罗研究基金会; 瑞典研究理事会;
关键词
BOVINE BETA-LACTOGLOBULIN; CHARGE REGULATION; MONTE-CARLO; ELECTROSTATIC INTERACTIONS; ALPHA-LACTALBUMIN; POISSON-BOLTZMANN; BINDING; STABILITY; POLYELECTROLYTES; COMPLEXATION;
D O I
10.1021/ct1003093
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Proton exchange between titratable amino acid residues and the surrounding solution gives rise to exciting electric processes in proteins. We present a proton titration scheme for studying acid-base equilibria in Metropolis Monte Carlo simulations where salt is treated at the Debye-Huckel level. The method, rooted in the Kirkwood model of impenetrable spheres, is applied on the three milk proteins alpha-lactalbumin, beta-lactoglobulin, and lactoferrin, for which we investigate the net-charge, molecular dipole moment, and charge capacitance. Over a wide range of pH and salt conditions, excellent agreement is found with more elaborate simulations where salt is explicitly included. The implicit salt scheme is orders of magnitude faster than the explicit analog and allows for transparent interpretation of physical mechanisms. It is shown how the method can be expanded to multiscale modeling of aqueous salt solutions of many biomolecules with nonstatic charge distributions. Important examples are protein-protein aggregation, protein-polyelectrolyte complexation, and protein-membrane association.
引用
收藏
页码:3259 / 3266
页数:8
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