Short-term transcriptome and microRNAs responses to exposure to different air pollutants in two population studies

被引:38
作者
Espin-Perez, Almudena [1 ]
Krauskopf, Julian [1 ]
Chadeau-Hyam, Marc [2 ]
van Veldhoven, Karin [2 ]
Chung, Fan [2 ]
Cullinan, Paul [2 ]
Piepers, Jolanda [1 ]
van Herwijnen, Marcel [1 ]
Kubesch, Nadine [3 ]
Carrasco-Turigas, Gloria [4 ]
Nieuwenhuijsen, Mark [4 ]
Vineis, Paolo [2 ]
Kleinjans, Jos C. S. [1 ]
de Kok, Theo M. C. M. [1 ]
机构
[1] Maastricht Univ, GROW Sch Oncol & Dev Biol, Dept Toxicogen, Maastricht, Netherlands
[2] Imperial Coll London, Sch Publ Hlth, Dept Epidemiol & Biostat, MRC PHE Ctr Environm & Hlth, London, England
[3] Univ Copenhagen, Ctr Epidemiol & Screening, Copenhagen, Denmark
[4] Barcelona Inst Global Hlth ISGlobal, Barcelona, Spain
关键词
Air pollution; Transcriptome; microRNA; Short-term exposure; GENE-EXPRESSION; MIR-17-92; POLYCISTRON; ALZHEIMERS-DISEASE; DOWN-REGULATION; LUNG CANCERS; CELL-CYCLE; IN-VIVO; POLLUTION; CLUSTER; APOPTOSIS;
D O I
10.1016/j.envpol.2018.06.051
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Diesel vehicle emissions are the major source of genotoxic compounds in ambient air from urban areas. These pollutants are linked to risks of cardiovascular diseases, lung cancer, respiratory infections and adverse neurological effects. Biological events associated with exposure to some air pollutants are widely unknown but applying omics techniques may help to identify the molecular processes that link exposure to disease risk. Most data on health risks are related to long-term exposure, so the aim of this study is to investigate the impact of short-term exposure (two hours) to air pollutants on the blood transcriptome and microRNA expression levels. We analyzed transcriptomics and microRNA expression using microarray technology on blood samples from volunteers participating in studies in London, the Oxford Street cohort, and, in Barcelona, the TAPAS cohort. Personal exposure levels measurements of particulate matter (PM10 PM2.5), ultrafine particles (UFPC), nitrogen oxides (NO2, NO and NOx), black carbon (BC) and carbon oxides (CO and CO2) were registered for each volunteer. Associations between air pollutant levels and gene/microRNA expression were evaluated using multivariate normal models (MVN). MVN-models identified compound-specific expression of blood cell genes and microRNAs associated with air pollution despite the low exposure levels, the short exposure periods and the relatively small sized cohorts. Hsa-miR-197-3p, hsa-miR-29a-3p, hsa-miR-15a-5p, hsa-miR-16-5p and hsa-miR-92a-3p are found significantly expressed in association with exposures. These microRNAs target also relevant transcripts, indicating their potential relevance in the research of omics-biomarkers responding to air pollution. Furthermore, these microRNAs are also known to be associated with diseases previously linked to air pollution exposure including several cancers such lung cancer and Alzheimer's disease. In conclusion, we identified in this study promising compound-specific mRNA and microRNA biomarkers after two hours of exposure to low levels of air pollutants during two hours that suggest increased cancer risks. (C) 2018 Published by Elsevier Ltd.
引用
收藏
页码:182 / 190
页数:9
相关论文
共 88 条
  • [1] Expression of Adiponectin Receptor 1 Is Indicative of Favorable Prognosis in Non-small Cell Lung Carcinoma
    Abdul-Ghafar, Jamshid
    Oh, Sung Soo
    Park, Sun-Mi
    Wairagu, Peninah
    Lee, Shun Nyung
    Jeong, Yangsik
    Eom, Minseob
    Yong, Suk-Joong
    Jung, Soon-Hee
    [J]. TOHOKU JOURNAL OF EXPERIMENTAL MEDICINE, 2013, 229 (02) : 153 - 162
  • [2] Evaluation of in vivo mutagenesis for assessing the health risk of air pollutants
    Aoki, Yasunobu
    [J]. GENES AND ENVIRONMENT, 2017, 39
  • [3] miR-15a and miR-16 Are Implicated in Cell Cycle Regulation in a Rb-Dependent Manner and Are Frequently Deleted or Down-regulated in Non-Small Cell Lung Cancer
    Bandi, Nora
    Zbinden, Samuel
    Gugger, Mathias
    Arnold, Marlene
    Kocher, Verena
    Hasan, Lara
    Kappeler, Andreas
    Brunner, Thomas
    Vassella, Erik
    [J]. CANCER RESEARCH, 2009, 69 (13) : 5553 - 5559
  • [4] MicroRNA dysregulation in schizophrenia
    Beveridge, Natalie J.
    Cairns, Murray J.
    [J]. NEUROBIOLOGY OF DISEASE, 2012, 46 (02) : 263 - 271
  • [5] MiR-15a and MiR-16 Control Bmi-1 Expression in Ovarian Cancer
    Bhattacharya, Resham
    Nicoloso, Milena
    Arvizo, Rochelle
    Wang, Enfeng
    Cortez, Angelica
    Rossi, Simona
    Calin, George A.
    Mukherjee, Priyabrata
    [J]. CANCER RESEARCH, 2009, 69 (23) : 9090 - 9095
  • [6] The miR-15a-miR-16-1 cluster controls prostate cancer by targeting multiple oncogenic activities
    Bonci, Desiree
    Coppola, Valeria
    Musumeci, Maria
    Addario, Antonio
    Giuffrida, Raffaella
    Memeo, Lorenzo
    D'Urso, Leonardo
    Pagliuca, Alfredo
    Biffoni, Mauro
    Labbaye, Catherine
    Bartucci, Monica
    Muto, Giovanni
    Peschle, Cesare
    De Maria, Ruggero
    [J]. NATURE MEDICINE, 2008, 14 (11) : 1271 - 1277
  • [7] A centrosomal mechanism involving CDK5RAP2 and CENPJ controls brain size
    Bond, J
    Roberts, E
    Springell, K
    Lizarraga, S
    Scott, S
    Higgins, J
    Hampshire, DJ
    Morrison, EE
    Leal, GF
    Silva, EO
    Costa, SMR
    Baralle, D
    Raponi, M
    Karbani, G
    Rashid, Y
    Jafri, H
    Bennett, C
    Corry, P
    Walsh, CA
    Woods, CG
    [J]. NATURE GENETICS, 2005, 37 (04) : 353 - 355
  • [8] miR-15a and miR-16-1 down-regulation in pituitary adenomas
    Bottoni, A
    Piccin, D
    Tagliati, F
    Luchin, A
    Zatelli, MC
    Uberti, ECD
    [J]. JOURNAL OF CELLULAR PHYSIOLOGY, 2005, 204 (01) : 280 - 285
  • [9] Recurrent Fusions in MYB and MYBL1 Define a Common, Transcription Factor-Driven Oncogenic Pathway in Salivary Gland Adenoid Cystic Carcinoma
    Brayer, Kathryn J.
    Frerich, Candace A.
    Kang, Huining
    Ness, Scott A.
    [J]. CANCER DISCOVERY, 2016, 6 (02) : 176 - 187
  • [10] Interleukin-6 Modulates the Expression of the Bone Morphogenic Protein Receptor Type II Through a Novel STAT3-microRNA Cluster 17/92 Pathway
    Brock, Matthias
    Trenkmann, Michelle
    Gay, Renate E.
    Michel, Beat A.
    Gay, Steffen
    Fischler, Manuel
    Ulrich, Silvia
    Speich, Rudolf
    Huber, Lars C.
    [J]. CIRCULATION RESEARCH, 2009, 104 (10) : 1184 - U139