A genome-wide association study identifies two new susceptibility loci for lung adenocarcinoma in the Japanese population

被引:144
作者
Shiraishi, Kouya [1 ]
Kunitoh, Hideo [2 ]
Daigo, Yataro [3 ,4 ]
Takahashi, Atsushi [5 ]
Goto, Koichi [6 ]
Sakamoto, Hiromi [7 ]
Ohnami, Sumiko [7 ]
Shimada, Yoko [1 ]
Ashikawa, Kyota [8 ]
Saito, Akira [9 ]
Watanabe, Shun-ichi [10 ]
Tsuta, Koji [11 ]
Kamatani, Naoyuki [5 ]
Yoshida, Teruhiko [7 ]
Nakamura, Yusuke [4 ]
Yokota, Jun [12 ]
Kubo, Michiaki [8 ]
Kohno, Takashi [1 ]
机构
[1] Natl Canc Ctr, Res Inst, Div Genome Biol, Tokyo 104, Japan
[2] Natl Canc Ctr, Div Thorac Oncol, Tokyo, Japan
[3] Shiga Univ Med Sci, Dept Med Oncol, Shiga, Japan
[4] Univ Tokyo, Inst Med Sci, Mol Med Lab, Ctr Human Genome, Tokyo, Japan
[5] RIKEN, Ctr Genom Med, Lab Stat Anal, Kanagawa, Japan
[6] Natl Canc Ctr Hosp E, Thorac Oncol Div, Chiba, Japan
[7] Natl Canc Ctr, Res Inst, Div Genet, Tokyo 104, Japan
[8] RIKEN, Ctr Genom Med, Lab Genotyping Dev, Kanagawa, Japan
[9] StaGen Co Ltd, Stat Genet Anal Div, Tokyo, Japan
[10] Natl Canc Ctr, Div Thorac Surg, Tokyo, Japan
[11] Natl Canc Ctr, Div Pathol & Clin Labs, Tokyo, Japan
[12] Natl Canc Ctr, Res Inst, Div Multistep Carcinogenesis, Tokyo 104, Japan
基金
日本学术振兴会;
关键词
ULCERATIVE-COLITIS; NEVER SMOKERS; CANCER RISK; GENOTYPES; STRATIFICATION; VARIANTS; 5P15.33; IMPACT; SCAN; TP63;
D O I
10.1038/ng.2353
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Lung adenocarcinoma is the most common histological type of lung cancer, and its incidence is increasing worldwide. To identify genetic factors influencing risk of lung adenocarcinoma, we conducted a genome-wide association study and two validation studies in the Japanese population comprising a total of 6,029 individuals with lung adenocarcinoma (cases) and 13,535 controls. We confirmed two previously reported risk loci, 5p15.33 (rs2853677, P-combined = 2.8 x 10(-40), odds ratio (OR) = 1.41) and 3q28 (rs10937405, P-combined = 6.9 x 10(-17), OR = 1.25), and identified two new susceptibility loci, 17q24.3 (rs7216064, P-combined = 7.4 x 10(-11), OR = 1.20) and 6p21.3 (rs3817963, P-combined = 2.7 x 10(-10), OR = 1.18). These data provide further evidence supporting a role for genetic susceptibility in the development of lung adenocarcinoma.
引用
收藏
页码:900 / +
页数:5
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    Diver, W. Ryan
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    Weinstein, Stephanie J.
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    Fan, Pi-Chuan
    Wu, Jer-Yuan
    Chen, Yuan-Tsong
    Kao, Lung-Sen
    Fann, Cathy Shen-Jang
    Wang, Shuu-Jiun
    [J]. CEPHALALGIA, 2018, 38 (03) : 466 - 475
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    Skibola, Christine F.
    Berndt, Sonja I.
    Vijai, Joseph
    Conde, Lucia
    Wang, Zhaoming
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    de Bakker, Paul I. W.
    Birmann, Brenda M.
    Vajdic, Claire M.
    Foo, Jia-Nee
    Bracci, Paige M.
    Vermeulen, Roel C. H.
    Slager, Susan L.
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    Wang, Sophia S.
    Linet, Martha S.
    Salles, Gilles
    Lan, Qing
    Severi, Gianluca
    Hjalgrim, Henrik
    Lightfoot, Tracy
    Melbye, Mads
    Gu, Jian
    Ghesquieres, Herve
    Link, Brian K.
    Morton, Lindsay M.
    Holly, Elizabeth A.
    Smith, Alex
    Tinker, Lesley F.
    Teras, Lauren R.
    Kricker, Anne
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    Spinelli, John J.
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    Giles, Graham G.
    Vineis, Paolo
    Monnereau, Alain
    Bertrand, Kimberly A.
    Albanes, Demetrius
    Zeleniuch-Jacquotte, Anne
    Gabbas, Attilio
    Chung, Charles C.
    Burdett, Laurie
    Hutchinson, Amy
    Lawrence, Charles
    Montalvan, Rebecca
    Liang, Liming
    Huang, Jinyan
    Ma, Baoshan
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2014, 95 (04) : 462 - 471
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    Nakamura, Minoru
    Nishida, Nao
    Kawashima, Minae
    Aiba, Yoshihiro
    Tanaka, Atsushi
    Yasunami, Michio
    Nakamura, Hitomi
    Komori, Atsumasai
    Nakamuta, Makoto
    Zeniya, Mikio
    Hashimoto, Etsuko
    Ohira, Hiromasa
    Yamamoto, Kazuhide
    Onji, Morikazu
    Kaneko, Shuichi
    Honda, Masao
    Yamagiwa, Satoshi
    Nakao, Kazuhiko
    Ichida, Takafumi
    Takikawa, Hajime
    Seike, Masataka
    Umemura, Takeji
    Ueno, Yoshiyuki
    Sakisaka, Shotaro
    Kikuchi, Kentaro
    Ebinuma, Hirotoshi
    Yamashiki, Noriyo
    Tamura, Sumito
    Sugawara, Yasuhiko
    Mori, Akira
    Yagi, Shintaro
    Shirabe, Ken
    Taketomi, Akinobu
    Arai, Kuniaki
    Monoe, Kyoko
    Ichikawa, Tatsuki
    Taniai, Makiko
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    Kumagi, Teru
    Abe, Masanori
    Yoshizawa, Kaname
    Joshita, Satoru
    Shimoda, Shinji
    Honda, Koichi
    Takahashi, Hiroki
    Hirano, Katsuji
    Takeyama, Yasuaki
    Harada, Kenichi
    Migita, Kiyoshi
    Ito, Masahiro
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2012, 91 (04) : 721 - 728