Smart computational light microscopes (SCLMs) of smart computational imaging laboratory (SCILab)

被引:76
作者
Fan, Yao [1 ,2 ,3 ,4 ]
Li, Jiaji [1 ,2 ,3 ,4 ]
Lu, Linpeng [1 ,2 ,3 ,4 ]
Sun, Jiasong [1 ,2 ,3 ,4 ]
Hu, Yan [1 ,2 ,3 ,4 ]
Zhang, Jialin [1 ,2 ,3 ,4 ]
Li, Zhuoshi [1 ,2 ,3 ,4 ]
Shen, Qian [1 ,2 ,3 ,4 ]
Wang, Bowen [1 ,2 ,3 ,4 ]
Zhang, Runnan [1 ,2 ,3 ,4 ]
Chen, Qian [1 ,2 ]
Zuo, Chao [1 ,2 ,3 ,4 ]
机构
[1] Nanjing Univ Sci & Technol, Sch Elect & Opt Engn, 200 Xiaolingwei St, Nanjing 210094, Jiangsu, Peoples R China
[2] Nanjing Univ Sci & Technol, Jiangsu Key Lab Spectral Imaging & Intelligent Se, 200 Xiaolingwei St, Nanjing 210094, Jiangsu, Peoples R China
[3] Nanjing Univ Sci & Technol, Smart Computat Imaging SCI Lab, 200 Xiaolingwei St, Nanjing 210094, Jiangsu, Peoples R China
[4] Nanjing Univ Sci & Technol, Smart Computat Imaging Res Inst SCRI, Nanjing 210019, Jiangsu, Peoples R China
基金
中国国家自然科学基金;
关键词
Microscope; Quantitative phase imaging (QPI); Phase contrast; Multi-contrast; Operating software; Biological applications; DIGITAL HOLOGRAPHIC MICROSCOPY; DIFFERENTIAL PHASE-CONTRAST; WAVE-FRONT SENSOR; OF-INTENSITY EQUATION; ON-CHIP MICROSCOPY; STRUCTURED-ILLUMINATION MICROSCOPY; OPTICAL DIFFRACTION TOMOGRAPHY; PARTIALLY COHERENT FIELDS; HIGH-RESOLUTION; WIDE-FIELD;
D O I
10.1186/s43074-021-00040-2
中图分类号
O43 [光学];
学科分类号
070207 ; 0803 ;
摘要
Computational microscopy, as a subfield of computational imaging, combines optical manipulation and image algorithmic reconstruction to recover multi-dimensional microscopic images or information of micro-objects. In recent years, the revolution in light-emitting diodes (LEDs), low-cost consumer image sensors, modern digital computers, and smartphones provide fertile opportunities for the rapid development of computational microscopy. Consequently, diverse forms of computational microscopy have been invented, including digital holographic microscopy (DHM), transport of intensity equation (TIE), differential phase contrast (DPC) microscopy, lens-free on-chip holography, and Fourier ptychographic microscopy (FPM). These computational microscopy techniques not only provide high-resolution, label-free, quantitative phase imaging capability but also decipher new and advanced biomedical research and industrial applications. Nevertheless, most computational microscopy techniques are still at an early stage of "proof of concept" or "proof of prototype" (based on commercially available microscope platforms). Translating those concepts to stand-alone optical instruments for practical use is an essential step for the promotion and adoption of computational microscopy by the wider bio-medicine, industry, and education community. In this paper, we present four smart computational light microscopes (SCLMs) developed by our laboratory, i.e., smart computational imaging laboratory (SCILab) of Nanjing University of Science and Technology (NJUST), China. These microscopes are empowered by advanced computational microscopy techniques, including digital holography, TIE, DPC, lensless holography, and FPM, which not only enables multi-modal contrast-enhanced observations for unstained specimens, but also can recover their three-dimensional profiles quantitatively. We introduce their basic principles, hardware configurations, reconstruction algorithms, and software design, quantify their imaging performance, and illustrate their typical applications for cell analysis, medical diagnosis, and microlens characterization.
引用
收藏
页数:65
相关论文
共 273 条
[1]  
Abbe E., 1873, Arch. Mikrosk. Anat., V9, P413, DOI [10.1007/BF02956173, DOI 10.1007/BF02956173]
[2]   Spatial and temporal coherence effects in interference microscopy and full-field optical coherence tomography [J].
Abdulhalim, Ibrahim .
ANNALEN DER PHYSIK, 2012, 524 (12) :787-804
[3]   Super-resolution microscopy on a photonic chip [J].
Abrahamsson, Sara .
NATURE PHOTONICS, 2020, 14 (07) :403-404
[4]   Low-cost, sub-micron resolution, wide-field computational microscopy using opensource hardware [J].
Aidukas, Tomas ;
Eckert, Regina ;
Harvey, Andrew R. ;
Waller, Laura ;
Konda, Pavan C. .
SCIENTIFIC REPORTS, 2019, 9 (1)
[5]   Living cell dry mass measurement using quantitative phase imaging with quadriwave lateral shearing interferometry: an accuracy and sensitivity discussion [J].
Aknoun, Sherazade ;
Savatier, Julien ;
Bon, Pierre ;
Galland, Frederic ;
Abdeladim, Lamiae ;
Wattellier, Benoit ;
Monneret, Serge .
JOURNAL OF BIOMEDICAL OPTICS, 2015, 20 (12)
[6]   Phase retrieval from series of images obtained by defocus variation [J].
Allen, LJ ;
Oxley, MP .
OPTICS COMMUNICATIONS, 2001, 199 (1-4) :65-75
[7]   Enhanced deterministic phase retrieval using a partially developed speckle field [J].
Almoro, Percival F. ;
Waller, Laura ;
Agour, Mostafa ;
Falldorf, Claas ;
Pedrini, Giancarlo ;
Osten, Wolfgang ;
Hanson, Steen G. .
OPTICS LETTERS, 2012, 37 (11) :2088-2090
[8]   Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques [J].
Amann, Rudolf ;
Fuchs, Bernhard M. .
NATURE REVIEWS MICROBIOLOGY, 2008, 6 (05) :339-348
[9]  
[Anonymous], 1997, Confocal laser scanning microscopy
[10]  
[Anonymous], 2004, Light Scattering Media Optics