Crystal structure, spectroscopic characterization, molecular docking, in vitro antibacterial potential and theoretical investigations on creatininium hydrogen maleate (CRHM) single crystal

被引:4
|
作者
Monisha, S. S. [1 ,2 ]
Bai, S. Jeslin Sunitha [2 ]
Sindhusha, S. [2 ]
Robert, H. Marshan [3 ]
机构
[1] Manonmaniam Sundaranar Univ, Reg 19113112132004, Tirunelveli 627012, Tamil Nadu, India
[2] Nesamony Mem Christian Coll, Dept Phys & Res Ctr, Marthandam 629165, Tamil Nadu, India
[3] Womens Christian Coll Nagercoil, Dept Phys & Res Ctr, Vettunimadam 629001, Tamil Nadu, India
关键词
DFT; Crystal structure; FTIR; Molecular docking; In vitro analysis; NONLINEAR-OPTICAL PROPERTIES; LASER DAMAGE THRESHOLD; GROWTH; MICROHARDNESS; SPECTRA; DESIGN; DFT;
D O I
10.1016/j.molstruc.2021.131913
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The main focus of this work is to synthesize creatininium hydrogen maleate (CRHM) single crystal by using slow evaporation technique and to analyze its antibacterial activity by means of molecular docking and invitro analysis. Single Crystal X-ray diffraction (SXRD) analysis reveals that the grown crystal crystallizes in orthorhombic structure with non centrosymmetric space group P2 1 2 1 2 1 and the optimized structural parameters explains the structural stability with N-H...O, C-H...O and O-H...O interactions. Hirshfeld surface analysis of grownup single crystal was performed to check and ensure the presence of intermolecular interactions that creates the molecule more stable. Natural Bond Orbital (NBO) analysis provides an efficient method for studying intermolecular and intramolecular hydrogen bonding, intermolecular charge transfer and delocalization of electron density. FTIR and Raman spectroscopy reveals the functional group associated with grown crystal along with absorption peaks and bands were studied and assigned in theoretical and experimental modes. The computed and experimental value of 1 H and 13 C NMR chemical shifts were performed. By TG/DTA analysis, it has been analyzed that the grown crystal is thermally stabile up to 165 degrees C. The mechanical strength of the grown crystal and work hardening coefficient is found to be 3 by using Vicker's microhardness test and confirms the soft nature that favors the bioactivity. The electronic transition of the materials were analyzed from UV- Visible absorbence spectrum it indicates that they exhibits good optical transparency in the UV-Visible and near IR region having lower cut-off wavelength of 310 nm and optical band gap of 3.9 eV. The green fluorescence nature of the synthesized material was analyzed by fluorescence spectral analysis. Frontier molecular orbital analysis has been carried out to explain the charge transfer within the molecule that enhances the antibacterial nature of the molecule and energy gap of the material was found to be 5.11 eV. Molecular electrostatic surface analysis revealed that positive potential is confined around the creatinine portion and negative region is scattered over the maleate portion exhibits an excellent ICT interactions exists within the lattice. The antibacterial activities of the compound have been screened by molecular docking. Moreover, the prepared compound is screened for its in vitro antibacterial activity against various types of bacteria, Escherichia coli, Pseudomonas aeruginosa, Serraitia marcescens, Bacillus cereus and Staphylococcus aureus . The results of these studies indicated that the title compound exhibit excellent antibacterial efficiency. (c) 2021 Elsevier B.V. All rights reserved.
引用
收藏
页数:20
相关论文
共 50 条
  • [21] Synthesis, single crystal structure, Hirshfeld surface and theoretical investigations on pyrimidine derivative
    Dhandapani, A.
    Manivarman, S.
    Subashchandrabose, S.
    CHEMICAL PHYSICS LETTERS, 2016, 655 : 17 - 29
  • [22] Synthesis, crystal structure, spectroscopic properties, antibacterial activity and theoretical studies of a novel difunctional acylhydrazone
    Jin, Yan-Xian
    Zhong, Ai-Guo
    Zhang, Yu-Jian
    Pan, Fu-You
    JOURNAL OF MOLECULAR STRUCTURE, 2011, 1002 (1-3) : 45 - 50
  • [23] Silver complexes with sulfathiazole and sulfamethoxazole: Synthesis, spectroscopic characterization, crystal structure and antibacterial assays
    Bormio Nunes, Julia Helena
    Ferraz de Paiva, Raphael Enoque
    Cuin, Alexandre
    Lustri, Wilton Rogerio
    Corbi, Pedro Paulo
    POLYHEDRON, 2015, 85 : 437 - 444
  • [24] Synthesis, crystal structure, and in vitro and in silico molecular docking of novel acyl thiourea derivatives
    Haribabu, Jebiti
    Subhashree, Govindarajulu Rangabashyam
    Saranya, Sivaraj
    Gomathi, Kannayiram
    Karvembu, Ramasamy
    Gayathri, Dasararaju
    JOURNAL OF MOLECULAR STRUCTURE, 2015, 1094 : 281 - 291
  • [25] A rhodanine derivative as a potential antibacterial and anticancer agent: Crystal structure, spectral characterization, DFT calculations, Hirshfeld surface analysis, in silico molecular docking and ADMET studies
    Guerraoui, Amal
    Goudjil, Meriem
    Direm, Amani
    Guerraoui, Abdenour
    Sengun, Ilkin Yucel
    Parlak, Cemal
    Djedouani, Amel
    Chelazzi, Laura
    Monti, Filippo
    Lunedei, Eugenio
    Boumaza, Abdecharif
    JOURNAL OF MOLECULAR STRUCTURE, 2023, 1280
  • [26] Synthesis, crystal structure, spectroscopic investigations, physicochemical properties of third-order NLO single crystal for optical applications
    Anandhan, A.
    Sivasankari, C.
    Saravanabhavan, M.
    Siva, V.
    Senthil, K.
    JOURNAL OF MOLECULAR STRUCTURE, 2020, 1203
  • [27] A novel ferrocene-palladium metal complex: synthesis, single crystal structure, in vitro cytotoxicity study and molecular docking
    Zhang, Zhonghui
    Du, Guoyuan
    Gong, Guidong
    Sheng, Yuwen
    Lu, Xiangyu
    Cai, Wentao
    Wang, Fei
    Zhao, Gang
    Journal of Molecular Structure, 2021, 1232
  • [28] A novel ferrocene-palladium metal complex: synthesis, single crystal structure, in vitro cytotoxicity study and molecular docking
    Zhang, Zhonghui
    Du, Guoyuan
    Gong, Guidong
    Sheng, Yuwen
    Lu, Xiangyu
    Cai, Wentao
    Wang, Fei
    Zhao, Gang
    JOURNAL OF MOLECULAR STRUCTURE, 2021, 1232
  • [29] Novel thiohydantoin derivatives: design, synthesis, spectroscopic characterization, crystal structure, SAR, DFT, molecular docking, pharmacological and toxicological activities
    Allah, Abderrazzak El Moutaouakil Ala
    Mortada, Salma
    Tuzun, Burak
    Guerrab, Walid
    Qostal, Mariem
    Mague, Joel T.
    Talbaoui, Ahmed
    Alzahrani, Abdullah Yahya Abdullah
    Faouzi, My El Abbes
    Ramli, Youssef
    JOURNAL OF MOLECULAR STRUCTURE, 2025, 1335
  • [30] Synthesis, crystal structure, spectroscopic characterization and theoretical study of Nicotinaldehyde N -phenyl semicarbazone
    Mendoza-Merono, Rafael
    Soria-Martinez, Ruben
    Garcia-Granda, Santiago
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2015, 71 : S325 - S325