A redox-based electrogenetic CRISPR system to connect with and control biological information networks

被引:53
作者
Bhokisham, Narendranath [1 ,2 ]
VanArsdale, Eric [2 ,3 ,4 ]
Stephens, Kristina T. [2 ,3 ,4 ]
Hauk, Pricila [2 ]
Payne, Gregory F. [2 ,3 ,4 ]
Bentley, William E. [2 ,3 ,4 ]
机构
[1] Univ Maryland, Coll Comp Math & Nat Sci, Biol Sci Grad Program, 4066 Campus Dr, College Pk, MD 20742 USA
[2] Univ Maryland, Inst Biosci & Biotechnol Res, 5115 Plant Sci Bldg, College Pk, MD 20742 USA
[3] Univ Maryland, Fischell Dept Bioengn, A James Clark Hall, College Pk, MD 20742 USA
[4] Univ Maryland, Robert E Fischell Inst Biomed Devices, Room 5102,A James Clark Hall, College Pk, MD 20742 USA
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
ESCHERICHIA-COLI; GENE-EXPRESSION; RNA INTERFERENCE; DOWN-REGULATION; ACTIVATION; CIRCUIT; NOISE; LOCALIZATION; REPRESSION; GENERATION;
D O I
10.1038/s41467-020-16249-x
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Electronic information can be transmitted to cells directly from microelectronics via electrode-activated redox mediators. These transmissions are decoded by redox-responsive promoters which enable user-specified control over biological function. Here, we build on this redox communication modality by establishing an electronic eCRISPR conduit of information exchange. This system acts as a biological signal processor, amplifying signal reception and filtering biological noise. We electronically amplify bacterial quorum sensing (QS) signaling by activating LasI, the autoinducer-1 synthase. Similarly, we filter out unintended noise by inhibiting the native SoxRS-mediated oxidative stress response regulon. We then construct an eCRISPR based redox conduit in both E. coli and Salmonella enterica. Finally, we display eCRISPR based information processing that allows transmission of spatiotemporal redox commands which are then decoded by gelatin-encapsulated E. coli. We anticipate that redox communication channels will enable biohybrid microelectronic devices that could transform our abilities to electronically interpret and control biological function. Redox-responsive transcriptional regulators can enable user-specified electronic control over biological functions. Here the authors demonstrate electronic control of CRISPRa and CRISPRi using redox signalling.
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页数:12
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