MULTI-LOSS CONVOLUTIONAL NETWORKS FOR GLAND ANALYSIS IN MICROSCOPY

被引:23
作者
BenTaieb, Aicha Q [1 ]
Kawahara, Jeremy [1 ]
Hamarneh, Ghassan [1 ]
机构
[1] Simon Fraser Univ, Sch Comp Sci, Med Image Anal Lab, Burnaby, BC V5A 1S6, Canada
来源
2016 IEEE 13TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI) | 2016年
关键词
Deep Learning; Histopathology; Classification; Segmentation;
D O I
10.1109/ISBI.2016.7493349
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Manual tissue diagnosis is the most prevalent approach to cancer diagnosis. However, it mainly relies on a subjective visual quantification of specific morphometric features, which often leads to a relatively limited reproducibility among experts. In most computational techniques proposed to automate the diagnostic procedure, accurate segmentation is paramount as a precursor to the extraction of relevant morphometric features. Since the ultimate goal of segmentation is generally classification, yet a given class imparts an expected tissue appearance beneficial to segmentation, we pose the problem of automatic tissue analysis as the joint task of segmentation and classification. We propose a novel multi-objective learning method that optimizes a single unified deep fully convolutional neural network with two distinct loss functions. We illustrate our reasoning on the task of colon adenocarcinomas diagnosis and show how glands' classification can facilitate their segmentation by adding class-specific spatial priors. The final classification also benefits from this joint learning framework yielding an improvement of 6% over classification-only models.
引用
收藏
页码:642 / 645
页数:4
相关论文
共 6 条
[1]   Mitosis Detection in Breast Cancer Histology Images with Deep Neural Networks [J].
Ciresan, Dan C. ;
Giusti, Alessandro ;
Gambardella, Luca M. ;
Schmidhuber, Juergen .
MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2013, PT II, 2013, 8150 :411-418
[2]   Automatic segmentation of colon glands using object-graphs [J].
Gunduz-Demir, Cigdem ;
Kandemir, Melih ;
Tosun, Akif Burak ;
Sokmensuer, Cenk .
MEDICAL IMAGE ANALYSIS, 2010, 14 (01) :1-12
[3]   ImageNet Classification with Deep Convolutional Neural Networks [J].
Krizhevsky, Alex ;
Sutskever, Ilya ;
Hinton, Geoffrey E. .
COMMUNICATIONS OF THE ACM, 2017, 60 (06) :84-90
[4]   U-Net: Convolutional Networks for Biomedical Image Segmentation [J].
Ronneberger, Olaf ;
Fischer, Philipp ;
Brox, Thomas .
MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION, PT III, 2015, 9351 :234-241
[5]  
Simonyan K., 2013, 13126034 ARXIV
[6]   A Stochastic Polygons Model for Glandular Structures in Colon Histology Images [J].
Sirinukunwattana, Korsuk ;
Snead, David R. J. ;
Rajpoot, Nasir M. .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2015, 34 (11) :2366-2378