Transverse Conductance of DNA Nucleotides in a Graphene Nanogap from First Principles
被引:168
作者:
Prasongkit, Jariyanee
论文数: 0引用数: 0
h-index: 0
机构:
Uppsala Univ, Dept Phys & Astron, Condensed Matter Theory Grp, SE-75120 Uppsala, SwedenUppsala Univ, Dept Phys & Astron, Condensed Matter Theory Grp, SE-75120 Uppsala, Sweden
Prasongkit, Jariyanee
[1
]
Grigoriev, Anton
论文数: 0引用数: 0
h-index: 0
机构:
Uppsala Univ, Dept Phys & Astron, Condensed Matter Theory Grp, SE-75120 Uppsala, SwedenUppsala Univ, Dept Phys & Astron, Condensed Matter Theory Grp, SE-75120 Uppsala, Sweden
Grigoriev, Anton
[1
]
Pathak, Biswarup
论文数: 0引用数: 0
h-index: 0
机构:
Uppsala Univ, Dept Phys & Astron, Condensed Matter Theory Grp, SE-75120 Uppsala, SwedenUppsala Univ, Dept Phys & Astron, Condensed Matter Theory Grp, SE-75120 Uppsala, Sweden
Pathak, Biswarup
[1
]
Ahuja, Rajeev
论文数: 0引用数: 0
h-index: 0
机构:
Uppsala Univ, Dept Phys & Astron, Condensed Matter Theory Grp, SE-75120 Uppsala, Sweden
Royal Inst Technol KTH, Dept Mat Sci & Engn, SE-10044 Stockholm, SwedenUppsala Univ, Dept Phys & Astron, Condensed Matter Theory Grp, SE-75120 Uppsala, Sweden
Ahuja, Rajeev
[1
,2
]
Scheicher, Ralph H.
论文数: 0引用数: 0
h-index: 0
机构:
Uppsala Univ, Dept Phys & Astron, Condensed Matter Theory Grp, SE-75120 Uppsala, SwedenUppsala Univ, Dept Phys & Astron, Condensed Matter Theory Grp, SE-75120 Uppsala, Sweden
Scheicher, Ralph H.
[1
]
机构:
[1] Uppsala Univ, Dept Phys & Astron, Condensed Matter Theory Grp, SE-75120 Uppsala, Sweden
[2] Royal Inst Technol KTH, Dept Mat Sci & Engn, SE-10044 Stockholm, Sweden
DNA sequencing;
graphene;
nanogap;
ab initio;
electronic transport;
molecular electronics;
TRANSLOCATION;
D O I:
10.1021/nl200147x
中图分类号:
O6 [化学];
学科分类号:
0703 ;
摘要:
The fabrication of nanopores in atomically thin graphene has recently been achieved, and translocation of DNA has been demonstrated. Taken together with an earlier proposal to use graphene nanogaps for the purpose of DNA sequencing, this approach can resolve the technical problem of achieving single-base resolution in electronic nucleobase detection. We have theoretically evaluated the performance of a graphene nanogap setup for the purpose of whole-genome sequencing, by employing density functional theory and the nonequilibrium Green's function method to investigate the transverse conductance properties of nucleotides inside the gap. In particular, we determined the electrical tunneling current variation at finite bias due to changes in the nucleotides orientation and lateral position. Although the resulting tunneling current is found to fluctuate over several orders of magnitude, a distinction between the four DNA bases appears possible, thus ranking the approach promising for rapid whole-genome sequencing applications.
机构:
Harvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Branton, Daniel
Deamer, David W.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Santa Cruz, Dept Chem & Biochem, Santa Cruz, CA 95064 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Deamer, David W.
Marziali, Andre
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Phys & Astron, Vancouver, BC V6T 1Z1, CanadaHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Marziali, Andre
Bayley, Hagan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Oxford, Dept Biol Chem, Oxford OX1 3TA, EnglandHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Bayley, Hagan
Benner, Steven A.
论文数: 0引用数: 0
h-index: 0
机构:
Fdn Appl Mol Evolut, Gainesville, FL 32604 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Benner, Steven A.
Butler, Thomas
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Phys, Seattle, WA 98195 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Butler, Thomas
Di Ventra, Massimiliano
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Phys, La Jolla, CA 92093 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Di Ventra, Massimiliano
论文数: 引用数:
h-index:
机构:
Garaj, Slaven
Hibbs, Andrew
论文数: 0引用数: 0
h-index: 0
机构:
Elect BioSci, San Diego, CA 92121 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Hibbs, Andrew
Huang, Xiaohua
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Bioengn, San Diego, CA 92093 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Huang, Xiaohua
Jovanovich, Stevan B.
论文数: 0引用数: 0
h-index: 0
机构:
Microchip Biotechnol Inc, Dublin, CA 94568 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Jovanovich, Stevan B.
Krstic, Predrag S.
论文数: 0引用数: 0
h-index: 0
机构:
Oak Ridge Natl Lab, Oak Ridge, TN 37831 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Krstic, Predrag S.
Lindsay, Stuart
论文数: 0引用数: 0
h-index: 0
机构:
Arizona State Univ, Dept Phys, Tempe, AZ 85287 USA
Arizona State Univ, Dept Chem, Tempe, AZ 85287 USA
Arizona State Univ, Biodesign Inst, Tempe, AZ 85287 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Lindsay, Stuart
Ling, Xinsheng Sean
论文数: 0引用数: 0
h-index: 0
机构:
Brown Univ, Dept Phys, Providence, RI 02912 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Ling, Xinsheng Sean
Mastrangelo, Carlos H.
论文数: 0引用数: 0
h-index: 0
机构:
Case Western Reserve Univ, Cleveland, OH 44106 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Mastrangelo, Carlos H.
论文数: 引用数:
h-index:
机构:
Meller, Amit
Oliver, John S.
论文数: 0引用数: 0
h-index: 0
机构:
NABsys Inc, Providence, RI 02906 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Oliver, John S.
Pershin, Yuriy V.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Phys, La Jolla, CA 92093 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Pershin, Yuriy V.
Ramsey, J. Michael
论文数: 0引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Chem, Chapel Hill, NC 27599 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Ramsey, J. Michael
Riehn, Robert
论文数: 0引用数: 0
h-index: 0
机构:
N Carolina State Univ, Dept Phys, Raleigh, NC 27695 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Riehn, Robert
Soni, Gautam V.
论文数: 0引用数: 0
h-index: 0
机构:
Boston Univ, Boston, MA 02215 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Soni, Gautam V.
Tabard-Cossa, Vincent
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Phys & Astron, Vancouver, BC V6T 1Z1, CanadaHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Tabard-Cossa, Vincent
Wanunu, Meni
论文数: 0引用数: 0
h-index: 0
机构:Harvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Wanunu, Meni
Wiggin, Matthew
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Biochem, Vancouver, BC V6T 1Z3, CanadaHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Wiggin, Matthew
Schloss, Jeffery A.
论文数: 0引用数: 0
h-index: 0
机构:
Natl Human Genome Res Inst, Natl Inst Hlth, Bethesda, MD 20892 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
机构:
Uppsala Univ, Dept Phys & Astron, Div Mat Theory, SE-75120 Uppsala, SwedenUppsala Univ, Dept Phys & Astron, Div Mat Theory, SE-75120 Uppsala, Sweden
Sanyal, B.
论文数: 引用数:
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机构:
Fransson, J.
Eriksson, O.
论文数: 0引用数: 0
h-index: 0
机构:
Uppsala Univ, Dept Phys & Astron, Div Mat Theory, SE-75120 Uppsala, SwedenUppsala Univ, Dept Phys & Astron, Div Mat Theory, SE-75120 Uppsala, Sweden
机构:
Harvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Branton, Daniel
Deamer, David W.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Santa Cruz, Dept Chem & Biochem, Santa Cruz, CA 95064 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Deamer, David W.
Marziali, Andre
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Phys & Astron, Vancouver, BC V6T 1Z1, CanadaHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Marziali, Andre
Bayley, Hagan
论文数: 0引用数: 0
h-index: 0
机构:
Univ Oxford, Dept Biol Chem, Oxford OX1 3TA, EnglandHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Bayley, Hagan
Benner, Steven A.
论文数: 0引用数: 0
h-index: 0
机构:
Fdn Appl Mol Evolut, Gainesville, FL 32604 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Benner, Steven A.
Butler, Thomas
论文数: 0引用数: 0
h-index: 0
机构:
Univ Washington, Dept Phys, Seattle, WA 98195 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Butler, Thomas
Di Ventra, Massimiliano
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Phys, La Jolla, CA 92093 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Di Ventra, Massimiliano
论文数: 引用数:
h-index:
机构:
Garaj, Slaven
Hibbs, Andrew
论文数: 0引用数: 0
h-index: 0
机构:
Elect BioSci, San Diego, CA 92121 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Hibbs, Andrew
Huang, Xiaohua
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Bioengn, San Diego, CA 92093 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Huang, Xiaohua
Jovanovich, Stevan B.
论文数: 0引用数: 0
h-index: 0
机构:
Microchip Biotechnol Inc, Dublin, CA 94568 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Jovanovich, Stevan B.
Krstic, Predrag S.
论文数: 0引用数: 0
h-index: 0
机构:
Oak Ridge Natl Lab, Oak Ridge, TN 37831 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Krstic, Predrag S.
Lindsay, Stuart
论文数: 0引用数: 0
h-index: 0
机构:
Arizona State Univ, Dept Phys, Tempe, AZ 85287 USA
Arizona State Univ, Dept Chem, Tempe, AZ 85287 USA
Arizona State Univ, Biodesign Inst, Tempe, AZ 85287 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Lindsay, Stuart
Ling, Xinsheng Sean
论文数: 0引用数: 0
h-index: 0
机构:
Brown Univ, Dept Phys, Providence, RI 02912 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Ling, Xinsheng Sean
Mastrangelo, Carlos H.
论文数: 0引用数: 0
h-index: 0
机构:
Case Western Reserve Univ, Cleveland, OH 44106 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Mastrangelo, Carlos H.
论文数: 引用数:
h-index:
机构:
Meller, Amit
Oliver, John S.
论文数: 0引用数: 0
h-index: 0
机构:
NABsys Inc, Providence, RI 02906 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Oliver, John S.
Pershin, Yuriy V.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Phys, La Jolla, CA 92093 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Pershin, Yuriy V.
Ramsey, J. Michael
论文数: 0引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Chem, Chapel Hill, NC 27599 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Ramsey, J. Michael
Riehn, Robert
论文数: 0引用数: 0
h-index: 0
机构:
N Carolina State Univ, Dept Phys, Raleigh, NC 27695 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Riehn, Robert
Soni, Gautam V.
论文数: 0引用数: 0
h-index: 0
机构:
Boston Univ, Boston, MA 02215 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Soni, Gautam V.
Tabard-Cossa, Vincent
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Phys & Astron, Vancouver, BC V6T 1Z1, CanadaHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Tabard-Cossa, Vincent
Wanunu, Meni
论文数: 0引用数: 0
h-index: 0
机构:Harvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Wanunu, Meni
Wiggin, Matthew
论文数: 0引用数: 0
h-index: 0
机构:
Univ British Columbia, Dept Biochem, Vancouver, BC V6T 1Z3, CanadaHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
Wiggin, Matthew
Schloss, Jeffery A.
论文数: 0引用数: 0
h-index: 0
机构:
Natl Human Genome Res Inst, Natl Inst Hlth, Bethesda, MD 20892 USAHarvard Univ, Dept Mol & Cell Biol, Cambridge, MA 02138 USA
机构:
Uppsala Univ, Dept Phys & Astron, Div Mat Theory, SE-75120 Uppsala, SwedenUppsala Univ, Dept Phys & Astron, Div Mat Theory, SE-75120 Uppsala, Sweden
Sanyal, B.
论文数: 引用数:
h-index:
机构:
Fransson, J.
Eriksson, O.
论文数: 0引用数: 0
h-index: 0
机构:
Uppsala Univ, Dept Phys & Astron, Div Mat Theory, SE-75120 Uppsala, SwedenUppsala Univ, Dept Phys & Astron, Div Mat Theory, SE-75120 Uppsala, Sweden