Identification of a pyroptosis-related prognosis gene signature and its relationship with an immune microenvironment in gliomas

被引:2
|
作者
Xiao, Shengying [1 ,2 ]
Yan, Zhiguang [3 ]
Zeng, Furen [2 ]
Lu, Yichen [2 ]
Qiu, Jun [2 ]
Zhu, Xiaodong [1 ]
机构
[1] Guangxi Med Univ, Canc Hosp, Dept Radiat Oncol, Nanning 530021, Guangxi, Peoples R China
[2] Hunan Normal Univ, Affiliated Hosp 1, Hunan Prov Peoples Hosp, Dept Oncol, Changsha 410016, Hunan, Peoples R China
[3] Hunan Univ Chinese Med, Ningxiang Hosp, Dept Orthoped, Ningxiang 410600, Hunan, Peoples R China
关键词
pyroptosis-related genes; prognosis; bioinformatics; immunity; DENDRITIC CELLS; TUMOR; MACROPHAGE; RARRES1;
D O I
10.1097/MD.0000000000029391
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Background: Glioma is the most common type of primary brain cancer, and the prognosis of most patients with glioma is poor. Pyroptosis is a newly discovered inflammatory programmed cell death. However, the expression of pyroptosis-related genes (PRGs) in glioma and its correlation with prognosis are unclear. Methods: 27 pyroptosis genes differentially expressed between glioma and adjacent normal tissues were identified. All glioma cases could be stratified into 2 subtypes based on these differentially expressed PRGs. The prognostic value of each PRG was evaluated to construct a prognostic model. Results: A novel 16-gene signature was constructed by using the least absolute shrinkage and selection operator Cox regression method. Then, patients with glioma were divided into low- and high-risk groups in the TCGA cohort. The survival rate of patients in the low-risk group was significantly higher than that in the high-risk group (P = .001). Patients with glioma from the Gene Expression Omnibus (GEO) cohort were stratified into 2 risk groups by using the median risk score. The overall survival (OS) of the low-risk group was longer than that of the high-risk group (P = .001). The risk score was considered an independent prognostic factor of the OS of patients with glioma. Gene ontology and Kyoto Encylopedia of Genes and Genomes analysis showed that the differentially expressed PRGs were mainly related to neutrophil activation involved in immune responses, focal adhesion, cell cycle, and p53 signaling pathway. Conclusion: PRGs could predict the prognosis of glioma and play significant roles in a tumor immune microenvironment.
引用
收藏
页数:10
相关论文
共 50 条
  • [41] Predicting the prognosis in patients with sepsis by a pyroptosis-related gene signature
    Liang, Shuang
    Xing, Manyu
    Chen, Xiang
    Peng, Jingyi
    Song, Zongbin
    Zou, Wangyuan
    FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [42] A pyroptosis-related gene signature for prognosis prediction in hepatocellular carcinoma
    Chen, Yongwei
    Zhu, Yanyun
    Dong, Yuanmei
    Li, Huizi
    Gao, Chumeng
    Zhu, Guoqiang
    Mi, Xiao
    Li, Chengcheng
    Xu, Yu
    Wang, Guoqiang
    Cai, Shangli
    Han, Yusheng
    Xu, Chunwei
    Wang, Wenxian
    Yang, Shizhong
    Ji, Wenbin
    FRONTIERS IN ONCOLOGY, 2023, 13
  • [43] Pyroptosis-related gene signature for predicting gastric cancer prognosis
    Khamis, Salem Saeed Saad
    Lu, Jianhua
    Yi, Yongdong
    Rao, Shangrui
    Sun, Weijian
    FRONTIERS IN ONCOLOGY, 2024, 14
  • [44] The Pyroptosis-Related Gene Signature Predicts the Prognosis of Hepatocellular Carcinoma
    Zhang, Shuqiao
    Li, Xinyu
    Zhang, Xiang
    Zhang, Shijun
    Tang, Chunzhi
    Kuang, Weihong
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2022, 8
  • [45] A pyroptosis-related gene signature predicting survival and tumor immune microenvironment in breast cancer and validation
    Gong, Mingkai
    Liu, Xiangping
    Zhao, Xian
    Wang, Haibo
    BMC CANCER, 2022, 22 (01)
  • [46] Identification of a pyroptosis related gene signature for predicting prognosis and estimating tumor immune microenvironment in bladder cancer
    Zhao, Jiahui
    Wu, Chunting
    Wang, Yongxing
    Li, Mingchuan
    Jiang, Yongguang
    Luo, Yong
    TRANSLATIONAL CANCER RESEARCH, 2022, 11 (07) : 1865 - +
  • [47] Identification of a novel pyroptosis-related gene signature correlated with the prognosis of diffuse glioma patients
    Zhang, Yize
    Xi, Feiyang
    Yu, Qing
    Lou, Weiming
    Zeng, Ziqiang
    Su, Ning
    Gao, Jianying
    Duan, Sainan
    Deng, Ying
    Guo, Sixuan
    Lai, Shuhui
    Tang, Xiaoli
    Zhang, Jicai
    ANNALS OF TRANSLATIONAL MEDICINE, 2021, 9 (24)
  • [48] A Comprehensive Analysis of Pyroptosis-Related lncRNAs Signature Associated With Prognosis and Tumor Immune Microenvironment of Pancreatic Adenocarcinoma
    Zhao, Kai
    Li, Xiangyu
    Shi, Yuanxin
    Lu, Yun
    Qiu, Peng
    Deng, Zhengdong
    Yao, Wei
    Wang, Jianming
    FRONTIERS IN GENETICS, 2022, 13
  • [49] A pyroptosis-related gene signature predicting survival and tumor immune microenvironment in breast cancer and validation
    Mingkai Gong
    Xiangping Liu
    Xian Zhao
    Haibo Wang
    BMC Cancer, 22
  • [50] A pyroptosis-related lncRNA signature predicts prognosis and immune microenvironment in head and neck squamous cell carcinoma
    Zhu, Wenying
    Ye, Zhipeng
    Chen, Ling
    Liang, Haifeng
    Cai, Qian
    INTERNATIONAL IMMUNOPHARMACOLOGY, 2021, 101