Identification of a pyroptosis-related prognosis gene signature and its relationship with an immune microenvironment in gliomas

被引:2
|
作者
Xiao, Shengying [1 ,2 ]
Yan, Zhiguang [3 ]
Zeng, Furen [2 ]
Lu, Yichen [2 ]
Qiu, Jun [2 ]
Zhu, Xiaodong [1 ]
机构
[1] Guangxi Med Univ, Canc Hosp, Dept Radiat Oncol, Nanning 530021, Guangxi, Peoples R China
[2] Hunan Normal Univ, Affiliated Hosp 1, Hunan Prov Peoples Hosp, Dept Oncol, Changsha 410016, Hunan, Peoples R China
[3] Hunan Univ Chinese Med, Ningxiang Hosp, Dept Orthoped, Ningxiang 410600, Hunan, Peoples R China
关键词
pyroptosis-related genes; prognosis; bioinformatics; immunity; DENDRITIC CELLS; TUMOR; MACROPHAGE; RARRES1;
D O I
10.1097/MD.0000000000029391
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Background: Glioma is the most common type of primary brain cancer, and the prognosis of most patients with glioma is poor. Pyroptosis is a newly discovered inflammatory programmed cell death. However, the expression of pyroptosis-related genes (PRGs) in glioma and its correlation with prognosis are unclear. Methods: 27 pyroptosis genes differentially expressed between glioma and adjacent normal tissues were identified. All glioma cases could be stratified into 2 subtypes based on these differentially expressed PRGs. The prognostic value of each PRG was evaluated to construct a prognostic model. Results: A novel 16-gene signature was constructed by using the least absolute shrinkage and selection operator Cox regression method. Then, patients with glioma were divided into low- and high-risk groups in the TCGA cohort. The survival rate of patients in the low-risk group was significantly higher than that in the high-risk group (P = .001). Patients with glioma from the Gene Expression Omnibus (GEO) cohort were stratified into 2 risk groups by using the median risk score. The overall survival (OS) of the low-risk group was longer than that of the high-risk group (P = .001). The risk score was considered an independent prognostic factor of the OS of patients with glioma. Gene ontology and Kyoto Encylopedia of Genes and Genomes analysis showed that the differentially expressed PRGs were mainly related to neutrophil activation involved in immune responses, focal adhesion, cell cycle, and p53 signaling pathway. Conclusion: PRGs could predict the prognosis of glioma and play significant roles in a tumor immune microenvironment.
引用
收藏
页数:10
相关论文
共 50 条
  • [41] A Newly Defined Pyroptosis-Related Gene Signature for the Prognosis of Bladder Cancer
    Chen, Weikang
    Zhang, Wenhao
    Zhou, Tao
    Cai, Jian
    Yu, Zhixian
    Wu, Zhigang
    INTERNATIONAL JOURNAL OF GENERAL MEDICINE, 2021, 14 : 8109 - 8120
  • [42] A novel pyroptosis-related LncRNA signature predicts prognosis and indicates tumor immune microenvironment in skin cutaneous melanoma
    Zhong, Jia'nan
    Wang, Zheng
    Hounye, Alphonse Houssou
    Liu, Jing
    Zhang, Jianglin
    Qi, Min
    LIFE SCIENCES, 2022, 307
  • [43] Expression of pyroptosis-related genes are correlated with immune microenvironment and predict prognosis in ESCA
    Shi, Youmeng
    Yang, Qiuxing
    Tai, Guomei
    Chen, Xudong
    JOURNAL OF CANCER RESEARCH AND CLINICAL ONCOLOGY, 2023, 149 (12) : 10701 - 10713
  • [44] Identification of a pyroptosis-related lncRNA signature in the regulation of prognosis, metabolism signals and immune infiltration in lung adenocarcinoma
    Zhou, Shuyi
    Cai, Yuan
    Xu, Zhijie
    Peng, Bi
    Liang, Qiuju
    Peng, Jinwu
    Yan, Yuanliang
    FRONTIERS IN ENDOCRINOLOGY, 2022, 13
  • [45] Expression of pyroptosis-related genes are correlated with immune microenvironment and predict prognosis in ESCA
    Youmeng Shi
    Qiuxing Yang
    Guomei Tai
    Xudong Chen
    Journal of Cancer Research and Clinical Oncology, 2023, 149 : 10701 - 10713
  • [46] Identification of an ATP metabolism-related signature associated with prognosis and immune microenvironment in gliomas
    Huang, Ruoyu
    Li, Guanzhang
    Wang, Zhiliang
    Hu, Huimin
    Zeng, Fan
    Zhang, Kenan
    Wang, Kuanyu
    Wu, Fan
    CANCER SCIENCE, 2020, 111 (07) : 2325 - 2335
  • [47] An Autophagy-Related Gene Signature Associated With Clinical Prognosis and Immune Microenvironment in Gliomas
    Xu, Yang
    Li, Renpeng
    Li, Xiaoxia
    Dong, Naijun
    Wu, Di
    Hou, Lin
    Yin, Kan
    Zhao, Chunhua
    FRONTIERS IN ONCOLOGY, 2020, 10
  • [48] A Novel Defined Pyroptosis-Related Gene Signature for Predicting Prognosis and Treatment of Glioma
    Yang, Zhihao
    Chen, Zhigang
    Wang, Yu
    Wang, Zhiwei
    Zhang, Deran
    Yue, Xiaoyu
    Zheng, Yinfei
    Li, Lianxin
    Bian, Erbao
    Zhao, Bing
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [49] A Novel Defined Pyroptosis-Related Gene Signature for the Prognosis of Acute Myeloid Leukemia
    Huang, Kecheng
    Xie, Linka
    Wang, Fan
    GENES, 2022, 13 (12)
  • [50] Identification of a potential prognostic model combining pyroptosis-related gene with immune microenvironment for pancreatic ductal adenocarcinoma
    Haoran Xie
    Jingxian Xu
    Qiuyan Zhao
    Journal of Cancer Research and Clinical Oncology, 2023, 149 : 17175 - 17187