Distribution of Naturally Occurring Norovirus Genogroups I, II, and IV in Oyster Tissues

被引:17
作者
Lowmoung, Taruta [1 ]
Pombubpa, Kannika [1 ]
Duangdee, Teerapong [2 ]
Tipayamongkholgul, Mathuros [3 ]
Kittigul, Leera [1 ]
机构
[1] Mahidol Univ, Fac Publ Hlth, Dept Microbiol, 420-1 Ratchawithi Rd, Bangkok 10400, Thailand
[2] Kasetsart Univ, Dept Marine Sci, Fac Fisheries, Bangkok 10900, Thailand
[3] Mahidol Univ, Fac Publ Hlth, Dept Epidemiol, Bangkok 10400, Thailand
关键词
Norovirus; Genogroup; Digestive tissues; Gills; Mantle; ENVIRONMENTAL WATER SAMPLES; ACUTE GASTROENTERITIS; MOLECULAR CHARACTERIZATION; GENOTYPE DISTRIBUTION; GENETIC DIVERSITY; ENTERIC VIRUSES; OUTBREAKS; CHILDREN; THAILAND; SHELLFISH;
D O I
10.1007/s12560-017-9305-5
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
This study evaluated different tissues of naturally contaminated oysters (Crassostrea belcheri) for the presence of noroviruses. RNA from digestive tissues, gills, and mantle of the oysters was extracted and tested for norovirus genogroup (G) I, GII, and GIV using RT-nested PCR. In spiking experiments with a known norovirus, GII.4, the detection limits were 2.97 x 10(2) RNA copies/g of digestive tissues, 2.62 x 10(2) RNA copies/g of gills, and 1.61 x 10(3) RNA copies/g of mantle. A total of 85 oyster samples were collected from a fresh market in Bangkok, Thailand. Noroviruses were found in the oyster samples (40/85, 47%): GI (29/85, 34.1%), GII (9/85, 10.5%), mixed GI and GII (1/85, 1.2%), and GIV (1/85, 1.2%). All three genogroups were found in the digestive tissues of oysters. Norovirus GI was present in all three tissues with the highest frequency in the mantle, and was additionally detected in multiple tissues in some oysters. GII was also detected in all three tissues, but was not detected in multiple tissues in the same oyster. For genogroup I, only GI.2 could be identified and it was found in all tissues. For genogroup II, three different genotypes were identified, namely GII.4 which was detected in the gills and the mantle, GII.17 which was detected in the digestive tissues, and GII.21 which was detected in the mantle. GIV.1 was identified in the digestive tissues of one oyster. This is the first report on the presence of human GIV.1 in oyster in Thailand, and the results indicate oyster as a possible vehicle for transmission of all norovirus genogroups in Thailand.
引用
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页码:415 / 422
页数:8
相关论文
共 36 条
  • [1] BASIC LOCAL ALIGNMENT SEARCH TOOL
    ALTSCHUL, SF
    GISH, W
    MILLER, W
    MYERS, EW
    LIPMAN, DJ
    [J]. JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) : 403 - 410
  • [2] Detection of human norovirus GIV.1 in China: A case report
    Ao, Yuan-yun
    Yu, Jie-mei
    Li, Li-li
    Jin, Miao
    Duan, Zhao-jun
    [J]. JOURNAL OF CLINICAL VIROLOGY, 2014, 61 (02) : 298 - 301
  • [3] Shellfish-Borne Viral Outbreaks: A Systematic Review
    Bellou, M.
    Kokkinos, P.
    Vantarakis, A.
    [J]. FOOD AND ENVIRONMENTAL VIROLOGY, 2013, 5 (01) : 13 - 23
  • [4] Norovirus and Other Human Enteric Viruses in Moroccan Shellfish
    Benabbes, Laila
    Ollivier, Joanna
    Schaeffer, Julien
    Parnaudeau, Sylvain
    Rhaissi, Houria
    Nourlil, Jalal
    Le Guyader, Francoise S.
    [J]. FOOD AND ENVIRONMENTAL VIROLOGY, 2013, 5 (01) : 35 - 40
  • [5] Molecular Epidemiology and Genotype Distribution of Noroviruses in Children in Thailand From 2004 to 2010: A Multi-Site Study
    Bodhidatta, Ladaporn
    Abente, Eugenio
    Neesanant, Pimmnapar
    Nakjarung, Kaewkanya
    Sirichote, Pantip
    Bunyarakyothin, Gaysorn
    Vithayasai, Niyada
    Mason, Carl J.
    [J]. JOURNAL OF MEDICAL VIROLOGY, 2015, 87 (04) : 664 - 674
  • [6] Emergence of a novel GII.17 norovirus - End of the GII.4 era?
    de Graaf, M.
    van Beek, J.
    Vennema, H.
    Podkolzin, A. T.
    Hewitt, J.
    Bucardo, F.
    Templeton, K.
    Mans, J.
    Nordgren, J.
    Reuter, G.
    Lynch, M.
    Rasmussen, L. D.
    Iritani, N.
    Chan, M. C.
    Martella, V.
    Ambert-Balay, K.
    Vinje, J.
    White, P. A.
    Koopmans, M. P.
    [J]. EUROSURVEILLANCE, 2015, 20 (26) : 8 - 15
  • [7] Complete Genome of the Human Norovirus GIV.1 Strain Lake Macquarie Virus
    Eden, John-Sebastian
    Lim, Kun Lee
    White, Peter A.
    [J]. JOURNAL OF VIROLOGY, 2012, 86 (18) : 10251 - 10252
  • [8] Detection of norovirus genogroup IV, klassevirus, and pepper mild mottle virus in sewage samples in South Korea
    Han, Tae-Hee
    Kim, Se-Cheol
    Kim, Seong-Taek
    Chung, Chang-Hyun
    Chung, Ju-Young
    [J]. ARCHIVES OF VIROLOGY, 2014, 159 (03) : 457 - 463
  • [9] Molecular detection and characterization of noroviruses in river water in Thailand
    Inoue, K.
    Motomura, K.
    Boonchan, M.
    Takeda, N.
    Ruchusatsawa, K.
    Guntapong, R.
    Tacharoenmuang, R.
    Sangkitporn, S.
    Chantaroj, S.
    [J]. LETTERS IN APPLIED MICROBIOLOGY, 2016, 62 (03) : 243 - 249
  • [10] Molecular characterization of norovirus GII.17 detected in healthy adult, intussusception patient, and acute gastroenteritis children in Thailand
    Khamrin, Pattara
    Kumthip, Kattareeya
    Yodmeeklin, Arpaporn
    Supadej, Kanittapon
    Ukarapol, Nuthapong
    Thongprachum, Aksara
    Okitsu, Shoko
    Hayakawa, Satoshi
    Ushijima, Hiroshi
    Maneekarn, Niwat
    [J]. INFECTION GENETICS AND EVOLUTION, 2016, 44 : 330 - 333