Structural basis for ion selectivity in TMEM175 K+ channels

被引:33
作者
Brunner, Janine D. [1 ,2 ,3 ,4 ,5 ]
Jakob, Roman P. [2 ]
Schulze, Tobias [6 ]
Neldner, Yvonne [1 ,8 ]
Moroni, Anna [7 ]
Thiel, Gerhard [6 ]
Maier, Timm [2 ]
Schenck, Stephan [1 ,3 ,4 ,5 ]
机构
[1] Univ Zurich, Dept Biochem, Zurich, Switzerland
[2] Univ Basel, Dept Biozentrum, Basel, Switzerland
[3] Paul Scherrer Inst, Lab Biomol Res, Villigen, Switzerland
[4] VIB, VIB VUB Ctr Struct Biol, Brussels, Belgium
[5] Vrije Univ Brussel, Struct Biol Brussels, Brussels, Belgium
[6] Tech Univ Darmstadt, Membrane Biophys, Darmstadt, Germany
[7] Univ Milan, Dept Biosci, Milan, Italy
[8] Univ Hosp Zurich, Dept Trauma, Zurich, Switzerland
来源
ELIFE | 2020年 / 9卷
基金
欧洲研究理事会;
关键词
GENOME-WIDE ASSOCIATION; TRANSPORTER REVEALS; POTASSIUM CHANNEL; BINDING; CONDUCTION; FILTER; MODEL; METAANALYSIS; COMPETITION; REFINEMENT;
D O I
10.7554/eLife.53683
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The TMEM175 family constitutes recently discovered K(+)channels that are important for autophagosome turnover and lysosomal pH regulation and are associated with the early onset of Parkinson Disease. TMEM175 channels lack a P-loop selectivity filter, a hallmark of all known K+ channels, raising the question how selectivity is achieved. Here, we report the X-ray structure of a closed bacterial TMEM175 channel in complex with a nanobody fusion-protein disclosing bound K+ ions. Our analysis revealed that a highly conserved layer of threonine residues in the pore conveys a basal K+ selectivity. An additional layer comprising two serines in human TMEM175 increases selectivity further and renders this channel sensitive to 4-aminopyridine and Zn2+. Our findings suggest that large hydrophobic side chains occlude the pore, forming a physical gate, and that channel opening by iris-like motions simultaneously relocates the gate and exposes the otherwise concealed selectivity filter to the pore lumen.
引用
收藏
页数:24
相关论文
共 50 条
  • [41] Designing artificial ion channels with strict K+/Na+ selectivity toward next-generation electric-eel-mimetic ionic power generation
    Li, Jipeng
    Du, Linhan
    Kong, Xian
    Wu, Jianzhong
    Lu, Diannan
    Jiang, Lei
    Guo, Wei
    NATIONAL SCIENCE REVIEW, 2023, 10 (12)
  • [42] Influence of non-P region domains on selectivity filter properties in voltage-gated K+ channels
    Immke, D
    Kiss, L
    LoTurco, J
    Korn, SJ
    RECEPTORS & CHANNELS, 1998, 6 (03) : 179 - 188
  • [43] Mechanistic basis for low threshold mechanosensitivity in voltage-dependent K+ channels
    Schmidt, Daniel
    del Marmol, Josefina
    MacKinnon, Roderick
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (26) : 10352 - 10357
  • [44] Highly Selective Artificial K+ Channels: An Example of Selectivity-Induced Transmembrane Potential
    Gilles, Arnaud
    Barboiu, Mihail
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2016, 138 (01) : 426 - 432
  • [45] Structural basis and synergism of ATP and Na+ activation in bacterial K+ uptake system KtrAB
    Chiang, Wesley Tien
    Chang, Yao-Kai
    Hui, Wei-Han
    Chang, Shu-Wei
    Liao, Chen-Yi
    Chang, Yi-Chuan
    Chen, Chun-Jung
    Wang, Wei-Chen
    Lai, Chien-Chen
    Wang, Chun-Hsiung
    Luo, Siou-Ying
    Huang, Ya-Ping
    Chou, Shan-Ho
    Horng, Tzyy-Leng
    Hou, Ming-Hon
    Muench, Stephen P.
    Chen, Ren-Shiang
    Tsai, Ming-Daw
    Hu, Nien-Jen
    NATURE COMMUNICATIONS, 2024, 15 (01)
  • [46] Evolution and Structural Characteristics of Plant Voltage-Gated K+ Channels
    Jegla, Timothy
    Busey, Gregory
    Assmann, Sarah M.
    PLANT CELL, 2018, 30 (12) : 2898 - 2909
  • [47] Engineering of a synthetic antibody fragment for structural and functional studies of K+ channels
    Rohaim, Ahmed
    Slezak, Tomasz
    Koh, Young Hoon
    Blachowicz, Lydia
    Kossiakoff, Anthony A.
    Roux, Benoit
    JOURNAL OF GENERAL PHYSIOLOGY, 2022, 154 (04)
  • [48] A bottom-up approach to the ion recognition mechanism of K+ channels from laser spectroscopy of hydrated partial peptide-alkali metal ion complexes
    Suzuki, Yukina
    Hirata, Keisuke
    Lisy, James M.
    Ishiuchi, Shun-ichi
    Fujii, Masaaki
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2022, 24 (35) : 20803 - 20812
  • [49] The Mechanism of Na+/K+ Selectivity in Mammalian Voltage-Gated Sodium Channels Based on Molecular Dynamics Simulation
    Xia, Mengdie
    Liu, Huihui
    Li, Yang
    Yan, Nieng
    Gong, Haipeng
    BIOPHYSICAL JOURNAL, 2013, 104 (11) : 2401 - 2409
  • [50] A mutant KcsA K+ channel with altered conduction properties and selectivity filter ion distribution
    Zhou, M
    MacKinnon, R
    JOURNAL OF MOLECULAR BIOLOGY, 2004, 338 (04) : 839 - 846