Towards Automated Tissue Characterization Using Parallel Bag-of-Features Experts Dealing with Two-Photon Excitation Fluorescence and Second Harmonic Generation Microscopy Datasets

被引:1
作者
Stanciu, Stefan G. [1 ]
Hristu, Radu [1 ]
Dumitru, Adrian [2 ]
Buga, Roxana M. [1 ]
Totu, Tiberiu [1 ]
Popescu, Marius [1 ]
Costache, Mariana [2 ]
机构
[1] Univ Politehn Bucuresti, Ctr Microscopy Microanal & Informat Proc, 313 Splaiul Independentei, Bucharest 060042, Romania
[2] Carol Davila Univ Med & Pharm, Dept Pathol, 8 Eroii Sanit, Bucharest 050471, Romania
来源
2018 20TH ANNIVERSARY INTERNATIONAL CONFERENCE ON TRANSPARENT OPTICAL NETWORKS (ICTON) | 2018年
关键词
two-photon excitation fluorescence microscopy; second harmonic generation fluorescence microscopy; automated tissue characterization; bag-of-features; MULTIPHOTON MICROSCOPY;
D O I
10.1109/ICTON.2018.8473668
中图分类号
TM [电工技术]; TN [电子技术、通信技术];
学科分类号
0808 ; 0809 ;
摘要
Label-free tissue imaging with Multiphoton Microscopy (MPM) techniques such as Two-Photon Excitation Fluorescence Microscopy (TPEF) or Second Harmonic Generation Microscopy (SHG) can provide cues of similar pathologic relevance to the information collected for characterization / confirmation purposes with traditional histopathology protocols based on fixation and staining. To date, various approaches for the automated characterization of MPM datasets have been proposed, but usually these address the outputs of a single technique, while MPM imaging sessions can simultaneously yield multiple information categories associated to distinct modalities. We discuss here the main concepts of the Bag-of-Features (BoF) paradigm used for automated image classification and retrieval, and a series of past experiments that dealt with BoF based tissue characterization. Further on, we present some of our connected efforts placed on the problem of human epithelial tissue characterization with TPEF & SHG and introduce a concept for MPM data classification based on multiple BoF experts that utilize in a parallel manner complementary information categories.
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页数:4
相关论文
共 17 条
[1]   Pseudo-HE images derived from CARS/TPEF/SHG multimodal imaging in combination with Raman-spectroscopy as a pathological screening tool [J].
Bocklitz, Thomas W. ;
Salah, Firas Subhi ;
Vogler, Nadine ;
Heuke, Sandro ;
Chernavskaia, Olga ;
Schmidt, Carsten ;
Waldner, Maximilian J. ;
Greten, Florian R. ;
Braeuer, Rolf ;
Schmitt, Michael ;
Stallmach, Andreas ;
Petersen, Iver ;
Popp, Juergen .
BMC CANCER, 2016, 16
[2]  
Caicedo JC, 2009, LECT NOTES ARTIF INT, V5651, P126, DOI 10.1007/978-3-642-02976-9_17
[3]   Second-harmonic imaging microscopy for visualizing biomolecular arrays in cells, tissues and organisms [J].
Campagnola, PJ ;
Loew, LM .
NATURE BIOTECHNOLOGY, 2003, 21 (11) :1356-1360
[4]   Action recognition in still images by learning spatial interest regions from videos [J].
Eweiwi, Abdalrahman ;
Cheema, Muhammad Shahzad ;
Bauckhage, Christian .
PATTERN RECOGNITION LETTERS, 2015, 51 :8-15
[5]  
Hoover EE, 2013, NAT PHOTONICS, V7, P93, DOI [10.1038/nphoton.2012.361, 10.1038/nphoton.2013.361]
[6]   Distinctive image features from scale-invariant keypoints [J].
Lowe, DG .
INTERNATIONAL JOURNAL OF COMPUTER VISION, 2004, 60 (02) :91-110
[7]   Combination of projectors, standard texture descriptors and bag of features for classifying images [J].
Nanni, Loris ;
Melucci, Massimo .
NEUROCOMPUTING, 2016, 173 :1602-1614
[8]  
O'hara Stephendraper., 2011, Introduction to the bag of features paradigm for image classification and retrieval
[9]  
Raykar V. C., 2009, P 26 ANN INT C MACH, P889, DOI [10.1145, 10.1145/1553374.1553488, DOI 10.1145/1553374.1553488]
[10]  
Rivenson Y., 2018, 180311293 ARXIV