Emergent bursting and synchrony in computer simulations of neuronal cultures

被引:14
作者
Maheswaranathan, Niru [1 ]
Ferrari, Silvia [2 ]
VanDongen, Antonius M. J. [3 ]
Henriquez, Craig S. [1 ]
机构
[1] Duke Univ, Dept Biomed Engn, Durham, NC 27708 USA
[2] Duke Univ, Dept Mech Engn & Mat Sci, Durham, NC 27708 USA
[3] Duke NUS Grad Med Sch, Program Neurosci & Behav Disorders, Singapore, Singapore
基金
美国国家科学基金会;
关键词
neuronal cultures; bursting; computer simulations; synchrony; small-world networks; NETWORKS; DYNAMICS; PATTERNS;
D O I
10.3389/fncom.2012.00015
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Experimental studies of neuronal cultures have revealed a wide variety of spiking network activity ranging from sparse, asynchronous firing to distinct, network-wide synchronous bursting. However, the functional mechanism driving these observed firing patterns are not well understood. In this work, we develop an in silico network of cortical neurons based on known features of similar in vitro networks. The activity from these simulations is found to closely mimic experimental data. Futhermore, the strength or degree of network bursting is found to depend on a few parameters: the density of the culture, the type of synaptic connections, and the ration of excitatory neutrons is increased. Interestingly, biologically prevalent values of parameters result in networks that are at the transition between strong bursting and sparse firing. Using principal components analysis, we show that a large fraction of the variance in firing rates is captured by the first component for bursting networks. These results have implications for understanding how information is encoded at the population level as well as for why certain network parameters are ubiquitous in cortical tissue.
引用
收藏
页码:1 / 9
页数:11
相关论文
共 31 条
  • [1] [Anonymous], PHYS REV LETT
  • [2] SELF-ORGANIZED CRITICALITY
    BAK, P
    TANG, C
    WIESENFELD, K
    [J]. PHYSICAL REVIEW A, 1988, 38 (01): : 364 - 374
  • [3] Synchronization in networks of excitatory and inhibitory neurons with sparse, random connectivity
    Börgers, C
    Kopell, N
    [J]. NEURAL COMPUTATION, 2003, 15 (03) : 509 - 538
  • [4] Simulation of networks of spiking neurons:: A review of tools and strategies
    Brette, Romain
    Rudolph, Michelle
    Carnevale, Ted
    Hines, Michael
    Beeman, David
    Bower, James M.
    Diesmann, Markus
    Morrison, Abigail
    Goodman, Philip H.
    Harris, Frederick C., Jr.
    Zirpe, Milind
    Natschlaeger, Thomas
    Pecevski, Dejan
    Ermentrout, Bard
    Djurfeldt, Mikael
    Lansner, Anders
    Rochel, Olivier
    Vieville, Thierry
    Muller, Eilif
    Davison, Andrew P.
    El Boustani, Sami
    Destexhe, Alain
    [J]. JOURNAL OF COMPUTATIONAL NEUROSCIENCE, 2007, 23 (03) : 349 - 398
  • [5] Multiple neural spike train data analysis: state-of-the-art and future challenges
    Brown, EN
    Kass, RE
    Mitra, PP
    [J]. NATURE NEUROSCIENCE, 2004, 7 (05) : 456 - 461
  • [6] The origin of spontaneous synchronized burst in cultures neuronal networks based on multi-electrode arrays
    Chen, Chuanping
    Chen, Lin
    Lin, Yunsheng
    Zeng, Shaoqun
    Luo, Qingming
    [J]. BIOSYSTEMS, 2006, 85 (02) : 137 - 143
  • [7] Emergent complex neural dynamics
    Chialvo, Dante R.
    [J]. NATURE PHYSICS, 2010, 6 (10) : 744 - 750
  • [8] Techniques for extracting single-trial activity patterns from large-scale neural recordings
    Churchland, Mark M.
    Yu, Byron M.
    Sahani, Maneesh
    Shenoy, Krishna V.
    [J]. CURRENT OPINION IN NEUROBIOLOGY, 2007, 17 (05) : 609 - 618
  • [9] The role of axonal delay in the synchronization of networks of coupled cortical oscillators
    Crook, SM
    Ermentrout, GB
    Vanier, MC
    [J]. JOURNAL OF COMPUTATIONAL NEUROSCIENCE, 1997, 4 (02) : 161 - 172
  • [10] Leader neurons in population bursts of 2D living neural networks
    Eckmann, J-P
    Jacobi, Shimshon
    Marom, Shimon
    Moses, Elisha
    Zbinden, Cyrille
    [J]. NEW JOURNAL OF PHYSICS, 2008, 10