Global Gene Expression Analysis of the Effects of Gold Nanoparticles on Human Dermal Fibroblasts

被引:42
作者
Yang, Yamin [1 ]
Qu, Yinghua [1 ]
Lue, Xiaoying [1 ]
机构
[1] Southeast Univ, Sch Biol Sci & Med Engn, State Key Lab Bioelect, Nanjing 210096, Peoples R China
基金
中国国家自然科学基金;
关键词
Gold Nanoparticles; Gene Expression Profile Microarray; Clustering and Gene Ontology; Pathway Analysis; Molecular Biocompatibility; OXIDATIVE STRESS; MICROARRAY DATA; IN-VITRO; CELLS; TOXICITY; ONTOLOGY; CYTOTOXICITY; PATHWAYS; LUNG; TOOL;
D O I
10.1166/jbn.2010.1128
中图分类号
TB3 [工程材料学];
学科分类号
0805 ; 080502 ;
摘要
In order to investigate the molecular effects of gold nanoparticles (GNPs) and cell interaction, after human dermal fibroblasts-fetal (HDF-f) treated with GNPs for 1, 4 and 8 h, the cytotoxicity was evaluated with methylthiazoltetrazolium (MTT) assay. Flow cytometry experiment was used to assess effects of GNPs on cell cycle and apoptosis. Differentially expressed genes in HDF-f treated with GNPs were obtained using gene expression profile microarray. The gene differential expression profile was analyzed by clustering, Gene Ontology (GO) and biological pathway. The results from these analyses were integrated to comprehensively interpret the data gained from microarray. It suggests that the exposure of HDF-f to GNPs might lead to the disturbance of cell cycle regulation, cellular oxidative stress and affect regulation of actin cytoskeleton, and other cellular activities such as cell adhesion, energy metabolism and signal transduction may be also affected. Compared with the cytotoxicological mechanisms induced by Ni2+ from our previous research and by GNPs from the present study, different underlying biological processes and gene regulations were found. The integration of microarray and bioinformatics analysis can provide a specific and efficient routine to discuss molecular effects of cellular response to biomaterials.
引用
收藏
页码:234 / 246
页数:13
相关论文
共 41 条
[1]   Gene Ontology: tool for the unification of biology [J].
Ashburner, M ;
Ball, CA ;
Blake, JA ;
Botstein, D ;
Butler, H ;
Cherry, JM ;
Davis, AP ;
Dolinski, K ;
Dwight, SS ;
Eppig, JT ;
Harris, MA ;
Hill, DP ;
Issel-Tarver, L ;
Kasarskis, A ;
Lewis, S ;
Matese, JC ;
Richardson, JE ;
Ringwald, M ;
Rubin, GM ;
Sherlock, G .
NATURE GENETICS, 2000, 25 (01) :25-29
[2]   The influence of transferrin stabilised magnetic nanoparticles on human dermal fibroblasts in culture [J].
Berry, CC ;
Charles, S ;
Wells, S ;
Dalby, MJ ;
Curtis, ASG .
INTERNATIONAL JOURNAL OF PHARMACEUTICS, 2004, 269 (01) :211-225
[3]   Activation of ROCK by RhoA is regulated by cell adhesion, shape, and cytoskeletal tension [J].
Bhadriraju, Kiran ;
Yang, Michael ;
Ruiz, Sami Alom ;
Pirone, Dana ;
Tan, John ;
Chen, Christopher S. .
EXPERIMENTAL CELL RESEARCH, 2007, 313 (16) :3616-3623
[4]   Effects and uptake of gold nanoparticles deposited at the air-liquid interface of a human epithelial airway model [J].
Brandenberger, C. ;
Rothen-Rutishauser, B. ;
Muehlfeld, C. ;
Schmid, O. ;
Ferron, G. A. ;
Maier, K. L. ;
Gehr, P. ;
Lenz, A. -G. .
TOXICOLOGY AND APPLIED PHARMACOLOGY, 2010, 242 (01) :56-65
[5]   Similar genes discovery system (SGDS): Application for predicting possible pathways by using GO semantic similarity measure [J].
Chiang, Jung-Hsien ;
Ho, Shing-Hua ;
Wang, Wen-Hung .
EXPERT SYSTEMS WITH APPLICATIONS, 2008, 35 (03) :1115-1121
[6]   Single-walled carbon nanotubes can induce pulmonary injury in mouse model [J].
Chou, Cheng-Chung ;
Hsiao, Hsiang-Yun ;
Hong, Qi-Sheng ;
Chen, Chun-Houh ;
Peng, Ya-Wen ;
Chen, Huei-Wen ;
Yang, Pan-Chyr .
NANO LETTERS, 2008, 8 (02) :437-445
[7]   Gold nanoparticles are taken up by human cells but do not cause acute cytotoxicity [J].
Connor, EE ;
Mwamuka, J ;
Gole, A ;
Murphy, CJ ;
Wyatt, MD .
SMALL, 2005, 1 (03) :325-327
[8]   How does gene expression clustering work? [J].
D'haeseleer, P .
NATURE BIOTECHNOLOGY, 2005, 23 (12) :1499-1501
[9]   GenMAPP, a new tool for viewing and analyzing microarray data on biological pathways [J].
Dahlquist, KD ;
Salomonis, N ;
Vranizan, K ;
Lawlor, SC ;
Conklin, BR .
NATURE GENETICS, 2002, 31 (01) :19-20
[10]   MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data [J].
Doniger, SW ;
Salomonis, N ;
Dahlquist, KD ;
Vranizan, K ;
Lawlor, SC ;
Conklin, BR .
GENOME BIOLOGY, 2003, 4 (01)