Genome-wide identification and characterization of the BES/BZR gene family in wheat and foxtail millet

被引：33

作者：

Liu, Dan ^{[1
]}

Cui, Yanjiao ^{[2
]}

Zhao, Zilong ^{[2
]}

Li, Suying ^{[2
]}

Liang, Dan ^{[1
]}

Wang, Conglei ^{[1
]}

Feng, Gang ^{[1
]}

Wang, Jianhe ^{[1
]}

Liu, Zhengli ^{[2
]}

机构：

[1] Tianjin Acad Agr Sci, Inst Crop Sci, Tianjin Key Lab Crop Genet & Breeding, Tianjin, Peoples R China

[2] Tangshan Normal Univ, Dept Life Sci, Tangshan, Peoples R China

来源：

BMC GENOMICS | 2021年 / 22卷 / 01期

基金：

中国国家自然科学基金;

关键词：

Brassinosteroid; BES; BZR transcription factor; Environmental stress; Wheat; Foxtail millet; TRANSCRIPTION FACTOR FAMILY; STRESS-INDUCED EXPRESSION; GIBBERELLIN; GROWTH; SEQUENCE; NETWORK; CLONING; KINASE; BZR1;

D O I：

10.1186/s12864-021-08002-5

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

Background BES/BZR family genes have vital roles in plant growth, development, and adaptation to environmental stimuli. However, they have not yet been characterized and systematically analyzed in wheat and foxtail millet. Results In the current study, five common and two unique BES/BZR genes were identified by genome-wide analysis in wheat and foxtail millet, respectively. These genes were unevenly distributed on 14 and five chromosomes of wheat and foxtail millet, respectively, and clustered in two subgroups in a phylogenetic analysis. The BES/BZR gene family members in each subgroup contained similar conserved motifs. Investigation of cis-acting elements and expression profile analysis revealed that the BES/BZR genes were predominantly expressed in leaf tissues of wheat and foxtail millet seedlings and responded to brassinosteroid, abscisic acid, and NaCl treatments. Conclusions Our results provide a basis for future studies on the function and molecular mechanisms of the BES/BZR gene family in wheat, foxtail millet, and other plants.

引用

页数：14

共 46 条

[21] BAK1, an Arabidopsis LRR receptor-like protein kinase, interacts with BRI1 and modulates brassinosteroid signaling [J].

Li, J ;

Wen, JQ ;

Lease, KA ;

Doke, JT ;

Tax, FE ;

Walker, JC .

CELL, 2002, 110 (02) :213-222

[22] A putative leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction [J].

Li, JM ;

Chory, J .

CELL, 1997, 90 (05) :929-938

[23]

Li JM, 2002, SCIENCE, V295, P1299

[24] An Interaction Between BZR1 and DELLAs Mediates Direct Signaling Crosstalk Between Brassinosteroids and Gibberellins in Arabidopsis [J].

Li, Qian-Feng ;

Wang, Chunming ;

Jiang, Lei ;

Li, Shuo ;

Sun, Samuel S. M. ;

He, Jun-Xian .

SCIENCE SIGNALING, 2012, 5 (244)

[25] Brassinosteroids Antagonize Jasmonate-Activated Plant Defense Responses through BRI1-EMS-SUPPRESSOR1 (BES1) [J].

Liao, Ke ;

Peng, Yu-Jun ;

Yuan, Li-Bing ;

Dai, Yang-Shuo ;

Chen, Qin-Fang ;

Yu, Lu-Jun ;

Bai, Ming-Yi ;

Zhang, Wen-Qing ;

Xie, Li-Juan ;

Xiao, Shi .

PLANT PHYSIOLOGY, 2020, 182 (02) :1066-1082

[26] Cloning and Expression Analysis of SiCDPK4, a Gene Related to Heterosis in Foxtail Millet [(Setaria italica (L.) P. Beauv.)] [J].

Liu, Dan ;

Li, Suying ;

Wang, Lina ;

Li, Qiang ;

Cui, Yanjiao ;

Dai, Xiaodong ;

Zhao, Zilong ;

Chen, Chao ;

Li, Junxia ;

Liu, Zhengli .

JOURNAL OF PLANT GROWTH REGULATION, 2019, 38 (02) :513-522

[27] Genetic Diversity and Population Structure of Elite Foxtail Millet [Setaria italica (L.) P. Beauv.] Germplasm in China [J].

Liu, Zhengli ;

Bai, Guihua ;

Zhang, Dadong ;

Zhu, Chengsong ;

Xia, Xueyan ;

Cheng, Ruhong ;

Shi, Zhigang .

CROP SCIENCE, 2011, 51 (04) :1655-1663

[28] Identification and characterization of the BZR transcription factor family and its expression in response to abiotic stresses in Zea mays L. [J].

Manoli, Alessandro ;

Trevisan, Sara ;

Quaggiotti, Silvia ;

Varotto, Serena .

PLANT GROWTH REGULATION, 2018, 84 (03) :423-436

[29] Molecular characterization of BZR transcription factor family and abiotic stress induced expression profiling in Brassica rapa [J].

Saha, Gopal ;

Park, Jong-In ;

Jung, Hee-Jeong ;

Ahmed, Nasar Uddin ;

Kayum, Md Abdul ;

Kang, Jong-Goo ;

Nou, Ill-Sup .

PLANT PHYSIOLOGY AND BIOCHEMISTRY, 2015, 92 :92-104

[30] Analyzing real-time PCR data by the comparative CT method [J].

Schmittgen, Thomas D. ;

Livak, Kenneth J. .

NATURE PROTOCOLS, 2008, 3 (06) :1101-1108

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