Genome-wide identification and characterization of the BES/BZR gene family in wheat and foxtail millet

被引:33
作者
Liu, Dan [1 ]
Cui, Yanjiao [2 ]
Zhao, Zilong [2 ]
Li, Suying [2 ]
Liang, Dan [1 ]
Wang, Conglei [1 ]
Feng, Gang [1 ]
Wang, Jianhe [1 ]
Liu, Zhengli [2 ]
机构
[1] Tianjin Acad Agr Sci, Inst Crop Sci, Tianjin Key Lab Crop Genet & Breeding, Tianjin, Peoples R China
[2] Tangshan Normal Univ, Dept Life Sci, Tangshan, Peoples R China
基金
中国国家自然科学基金;
关键词
Brassinosteroid; BES; BZR transcription factor; Environmental stress; Wheat; Foxtail millet; TRANSCRIPTION FACTOR FAMILY; STRESS-INDUCED EXPRESSION; GIBBERELLIN; GROWTH; SEQUENCE; NETWORK; CLONING; KINASE; BZR1;
D O I
10.1186/s12864-021-08002-5
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background BES/BZR family genes have vital roles in plant growth, development, and adaptation to environmental stimuli. However, they have not yet been characterized and systematically analyzed in wheat and foxtail millet. Results In the current study, five common and two unique BES/BZR genes were identified by genome-wide analysis in wheat and foxtail millet, respectively. These genes were unevenly distributed on 14 and five chromosomes of wheat and foxtail millet, respectively, and clustered in two subgroups in a phylogenetic analysis. The BES/BZR gene family members in each subgroup contained similar conserved motifs. Investigation of cis-acting elements and expression profile analysis revealed that the BES/BZR genes were predominantly expressed in leaf tissues of wheat and foxtail millet seedlings and responded to brassinosteroid, abscisic acid, and NaCl treatments. Conclusions Our results provide a basis for future studies on the function and molecular mechanisms of the BES/BZR gene family in wheat, foxtail millet, and other plants.
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页数:14
相关论文
共 46 条
[1]   Reference genome sequence of the model plant Setaria [J].
Bennetzen, Jeffrey L. ;
Schmutz, Jeremy ;
Wang, Hao ;
Percifield, Ryan ;
Hawkins, Jennifer ;
Pontaroli, Ana C. ;
Estep, Matt ;
Feng, Liang ;
Vaughn, Justin N. ;
Grimwood, Jane ;
Jenkins, Jerry ;
Barry, Kerrie ;
Lindquist, Erika ;
Hellsten, Uffe ;
Deshpande, Shweta ;
Wang, Xuewen ;
Wu, Xiaomei ;
Mitros, Therese ;
Triplett, Jimmy ;
Yang, Xiaohan ;
Ye, Chu-Yu ;
Mauro-Herrera, Margarita ;
Wang, Lin ;
Li, Pinghua ;
Sharma, Manoj ;
Sharma, Rita ;
Ronald, Pamela C. ;
Panaud, Olivier ;
Kellogg, Elizabeth A. ;
Brutnell, Thomas P. ;
Doust, Andrew N. ;
Tuskan, Gerald A. ;
Rokhsar, Daniel ;
Devos, Katrien M. .
NATURE BIOTECHNOLOGY, 2012, 30 (06) :555-+
[2]   Overexpression of wheat Na+/H+ antiporter TNHX1 and H+-pyrophosphatase TVP1 improve salt- and drought-stress tolerance in Arabidopsis thaliana plants [J].
Brini, Faical ;
Hanin, Moez ;
Mezghani, Imed ;
Berkowitz, Gerald A. ;
Masmoudi, Khaled .
JOURNAL OF EXPERIMENTAL BOTANY, 2007, 58 (02) :301-308
[3]   Genome-wide identification and characterization of the BES1 gene family in apple (Malus domestica) [J].
Cao, X. ;
Khaliq, A. ;
Lu, S. ;
Xie, M. ;
Ma, Z. ;
Mao, J. ;
Chen, B. .
PLANT BIOLOGY, 2020, 22 (04) :723-733
[4]  
Chen C., 2018, BIORXIV, V2018, P289660
[5]   A History of Brassinosteroid Research from 1970 through 2005: Thirty-Five Years of Phytochemistry, Physiology, Genes, and Mutants [J].
Clouse, Steven D. .
JOURNAL OF PLANT GROWTH REGULATION, 2015, 34 (04) :828-844
[6]   BES/BZR Transcription Factor TaBZR2 Positively Regulates Drought Responses by Activation of TaGST1 [J].
Cui, Xiao-Yu ;
Gao, Yuan ;
Guo, Jun ;
Yu, Tai-Fei ;
Zheng, Wei-Jun ;
Liu, Yong-Wei ;
Chen, Jun ;
Xu, Zhao-Shi ;
Ma, You-Zhi .
PLANT PHYSIOLOGY, 2019, 180 (01) :605-620
[7]   Brassinosteroid: a biotechnological target for enhancing crop yield and stress tolerance [J].
Divi, Uday K. ;
Krishna, Priti .
NEW BIOTECHNOLOGY, 2009, 26 (3-4) :131-136
[8]   Characterization of Brassinazole resistant (BZR) gene family and stress induced expression in Eucalyptus grandis [J].
Fan, Chunjie ;
Guo, Guangsheng ;
Yan, Huifang ;
Qiu, Zhenfei ;
Liu, Qianyu ;
Zeng, Bingshan .
PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS, 2018, 24 (05) :821-831
[9]  
Friedrichsen DM, 2002, GENETICS, V162, P1445
[10]   Molecular mechanism for the interaction between gibberellin and brassinosteroid signaling pathways in Arabidopsis [J].
Gallego-Bartolome, Javier ;
Minguet, Eugenio G. ;
Grau-Enguix, Federico ;
Abbas, Mohamad ;
Locascio, Antonella ;
Thomas, Stephen G. ;
Alabadi, David ;
Blazquez, Miguel A. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (33) :13446-13451